/EXTERNAL BLUEPRINT/K010521_1_lane_gembs

BACK

SAMPLE K010521_1_lane_gembs




Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 1311352416 100.00 % 655676208 100.00 % 655676208 100.00 %
General Reads 1266034784 96.54 % 634978085 96.84 % 631056699 96.25 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 22611596 1.72 % 11326050 1.73 % 11285546 1.72 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 22706036 1.73 % 9372073 1.43 % 13333963 2.03 %
Bisulfite_reads C2T 677801855 51.69 % 339993984 51.85 % 337807871 51.52 %
Bisulfite_reads G2A 610844525 46.58 % 306310151 46.72 % 304534374 46.45 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 508146427
Average Unique 77.50 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 47395305686 35.43 % 19005348584 28.42 % 28389957102 42.45 %
Base Counts Overall C 18750849850 14.02 % 885954419 1.32 % 17864895431 26.71 %
Base Counts Overall G 19049038436 14.24 % 18174207900 27.17 % 874830536 1.31 %
Base Counts Overall T 47129800114 35.24 % 28152242983 42.09 % 18977557131 28.38 %
Base Counts Overall N 1432952346 1.07 % 661219330 0.99 % 771733016 1.15 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate 0.9993535179411106
Over Conversion Rate NA



Correct Pairs

Concept Total Reads
Correct Pairs 618776266



Mapping Quality

Mapping Quality Histogram
K010521_1_lane_gembs.mapq.png



Insert Size Plot

Insert Size Histogram
K010521_1_lane_gembs.isize.png



Mapping Lanes Reports

LANE REPORTS
EXTERNAL-K010521_1798763_2