{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 104105326, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 101148935, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 97.16, 
            "paired": 104105326, 
            "paired_qc_failed": 0, 
            "read1": 52052663, 
            "read1_qc_failed": 0, 
            "read2": 52052663, 
            "read2_qc_failed": 0, 
            "paired_properly": 99935766, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 95.99, 
            "with_itself": 100755756, 
            "with_itself_qc_failed": 0, 
            "singletons": 393179, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.38, 
            "diff_chroms": 64805, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 104471744, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 101485188, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 97.14, 
            "paired": 104471744, 
            "paired_qc_failed": 0, 
            "read1": 52235872, 
            "read1_qc_failed": 0, 
            "read2": 52235872, 
            "read2_qc_failed": 0, 
            "paired_properly": 100570496, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 96.27, 
            "with_itself": 101112353, 
            "with_itself_qc_failed": 0, 
            "singletons": 372835, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.36, 
            "diff_chroms": 208160, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 45900870, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 10612822, 
            "paired_opt_dupes": 3324, 
            "dupes_pct": 0.231212
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 44719965, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 1561842, 
            "paired_opt_dupes": 6437, 
            "dupes_pct": 0.034925
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 45884870, 
            "distinct_read_pairs": 35276323, 
            "one_read_pair": 26807024, 
            "two_read_pair": 6723323, 
            "NRF": 0.768801, 
            "PBC1": 0.759915, 
            "PBC2": 3.987169
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 44378069, 
            "distinct_read_pairs": 42863103, 
            "one_read_pair": 41409228, 
            "two_read_pair": 1404847, 
            "NRF": 0.965862, 
            "PBC1": 0.966081, 
            "PBC2": 29.47597
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 70576096, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 70576096, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 70576096, 
            "paired_qc_failed": 0, 
            "read1": 35288048, 
            "read1_qc_failed": 0, 
            "read2": 35288048, 
            "read2_qc_failed": 0, 
            "paired_properly": 70576096, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 70576096, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 86316246, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 86316246, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 86316246, 
            "paired_qc_failed": 0, 
            "read1": 43158123, 
            "read1_qc_failed": 0, 
            "read2": 43158123, 
            "read2_qc_failed": 0, 
            "paired_properly": 86316246, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 86316246, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 71913, 
        "Np": 0, 
        "N_opt": 71913, 
        "N_consv": 71913, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 145, 
            "corr_est_frag_len": 0.313503367351684, 
            "phantom_peak": 55, 
            "corr_phantom_peak": 0.2842404, 
            "argmin_corr": 1500, 
            "min_corr": 0.1750331, 
            "NSC": 1.791109, 
            "RSC": 1.267958
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.497032159671
        }, 
        "rep1-pr1": {
            "FRiP": 0.48926625749
        }, 
        "rep1-pr2": {
            "FRiP": 0.489725233275
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.476103137161
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.157107794717, 
            "auc": 0.495146227146, 
            "ch_div": 0.131098542328, 
            "elbow_pt": 0.0, 
            "jsd": 0.851521749127, 
            "syn_auc": 0.506114520227, 
            "syn_elbow_pt": 0.438410682943, 
            "syn_jsd": 0.523975213381
        }
    ]
}