{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 179016220, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 171620651, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 95.87, 
            "paired": 179016220, 
            "paired_qc_failed": 0, 
            "read1": 89508110, 
            "read1_qc_failed": 0, 
            "read2": 89508110, 
            "read2_qc_failed": 0, 
            "paired_properly": 169478102, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 94.67, 
            "with_itself": 169902562, 
            "with_itself_qc_failed": 0, 
            "singletons": 1718089, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.96, 
            "diff_chroms": 114858, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 65794820, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 63417692, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 96.39, 
            "paired": 65794820, 
            "paired_qc_failed": 0, 
            "read1": 32897410, 
            "read1_qc_failed": 0, 
            "read2": 32897410, 
            "read2_qc_failed": 0, 
            "paired_properly": 61746812, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 93.85, 
            "with_itself": 61970109, 
            "with_itself_qc_failed": 0, 
            "singletons": 1447583, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 2.2, 
            "diff_chroms": 55379, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 75576487, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 12875515, 
            "paired_opt_dupes": 5025, 
            "dupes_pct": 0.170364
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 26833523, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 435866, 
            "paired_opt_dupes": 1445, 
            "dupes_pct": 0.016243
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 75575337, 
            "distinct_read_pairs": 62700051, 
            "one_read_pair": 51702535, 
            "two_read_pair": 9363382, 
            "NRF": 0.829636, 
            "PBC1": 0.824601, 
            "PBC2": 5.52178
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 26817652, 
            "distinct_read_pairs": 26382149, 
            "one_read_pair": 25952967, 
            "two_read_pair": 422975, 
            "NRF": 0.983761, 
            "PBC1": 0.983732, 
            "PBC2": 61.358158
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 125401944, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 125401944, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 125401944, 
            "paired_qc_failed": 0, 
            "read1": 62700972, 
            "read1_qc_failed": 0, 
            "read2": 62700972, 
            "read2_qc_failed": 0, 
            "paired_properly": 125401944, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 125401944, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 52795314, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 52795314, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 52795314, 
            "paired_qc_failed": 0, 
            "read1": 26397657, 
            "read1_qc_failed": 0, 
            "read2": 26397657, 
            "read2_qc_failed": 0, 
            "paired_properly": 52795314, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 52795314, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 226492, 
        "Np": 0, 
        "N_opt": 226492, 
        "N_consv": 226492, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 190, 
            "corr_est_frag_len": 0.1739389860233, 
            "phantom_peak": 50, 
            "corr_phantom_peak": 0.1788989, 
            "argmin_corr": 1500, 
            "min_corr": 0.1698935, 
            "NSC": 1.023812, 
            "RSC": 0.4492276
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.247909575132
        }, 
        "rep1-pr1": {
            "FRiP": 0.278600350169
        }, 
        "rep1-pr2": {
            "FRiP": 0.277139722308
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.206929880905
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.247524655808, 
            "auc": 0.49635835612, 
            "ch_div": 0.10040005678, 
            "elbow_pt": 0.0, 
            "jsd": 0.680370427387, 
            "syn_auc": 0.506192503127, 
            "syn_elbow_pt": 0.158197949101, 
            "syn_jsd": 0.332939921064
        }
    ]
}
