{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 81383716, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 79024591, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 97.1, 
            "paired": 81383716, 
            "paired_qc_failed": 0, 
            "read1": 40691858, 
            "read1_qc_failed": 0, 
            "read2": 40691858, 
            "read2_qc_failed": 0, 
            "paired_properly": 77670351, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 95.44, 
            "with_itself": 78152558, 
            "with_itself_qc_failed": 0, 
            "singletons": 872033, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 1.07, 
            "diff_chroms": 255814, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 109206430, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 106664791, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 97.67, 
            "paired": 109206430, 
            "paired_qc_failed": 0, 
            "read1": 54603215, 
            "read1_qc_failed": 0, 
            "read2": 54603215, 
            "read2_qc_failed": 0, 
            "paired_properly": 104044796, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 95.27, 
            "with_itself": 105477300, 
            "with_itself_qc_failed": 0, 
            "singletons": 1187491, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 1.09, 
            "diff_chroms": 959464, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 34488684, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 613246, 
            "paired_opt_dupes": 5371, 
            "dupes_pct": 0.017781
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 46114687, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 441722, 
            "paired_opt_dupes": 6992, 
            "dupes_pct": 0.009579
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 34487015, 
            "distinct_read_pairs": 33873793, 
            "one_read_pair": 33271122, 
            "two_read_pair": 592365, 
            "NRF": 0.982219, 
            "PBC1": 0.982208, 
            "PBC2": 56.16659
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 46055208, 
            "distinct_read_pairs": 45615199, 
            "one_read_pair": 45182227, 
            "two_read_pair": 427658, 
            "NRF": 0.990446, 
            "PBC1": 0.990508, 
            "PBC2": 105.650372
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 67750876, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 67750876, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 67750876, 
            "paired_qc_failed": 0, 
            "read1": 33875438, 
            "read1_qc_failed": 0, 
            "read2": 33875438, 
            "read2_qc_failed": 0, 
            "paired_properly": 67750876, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 67750876, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 91345930, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 91345930, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 91345930, 
            "paired_qc_failed": 0, 
            "read1": 45672965, 
            "read1_qc_failed": 0, 
            "read2": 45672965, 
            "read2_qc_failed": 0, 
            "paired_properly": 91345930, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 91345930, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 44149, 
        "Np": 0, 
        "N_opt": 44149, 
        "N_consv": 44149, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 160, 
            "corr_est_frag_len": 0.193328956122805, 
            "phantom_peak": 50, 
            "corr_phantom_peak": 0.1971673, 
            "argmin_corr": 1500, 
            "min_corr": 0.1733724, 
            "NSC": 1.115108, 
            "RSC": 0.8386903
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.18598314337
        }, 
        "rep1-pr1": {
            "FRiP": 0.18945849408
        }, 
        "rep1-pr2": {
            "FRiP": 0.189027611671
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.159985124784
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.277687137764, 
            "auc": 0.495034037996, 
            "ch_div": 0.107200051182, 
            "elbow_pt": 0.0, 
            "jsd": 0.62103415391, 
            "syn_auc": 0.502545213333, 
            "syn_elbow_pt": 0.190291692468, 
            "syn_jsd": 0.303303045471
        }
    ]
}