{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 60947142, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 24160688, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 39.64, 
            "paired": 60947142, 
            "paired_qc_failed": 0, 
            "read1": 30473571, 
            "read1_qc_failed": 0, 
            "read2": 30473571, 
            "read2_qc_failed": 0, 
            "paired_properly": 23547720, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 38.64, 
            "with_itself": 23924828, 
            "with_itself_qc_failed": 0, 
            "singletons": 235860, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.39, 
            "diff_chroms": 19780, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 124377178, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 122176918, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.23, 
            "paired": 124377178, 
            "paired_qc_failed": 0, 
            "read1": 62188589, 
            "read1_qc_failed": 0, 
            "read2": 62188589, 
            "read2_qc_failed": 0, 
            "paired_properly": 121113443, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 97.38, 
            "with_itself": 121685768, 
            "with_itself_qc_failed": 0, 
            "singletons": 491150, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.39, 
            "diff_chroms": 186530, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 10662434, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 4248218, 
            "paired_opt_dupes": 38392, 
            "dupes_pct": 0.398429
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 53571906, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 575059, 
            "paired_opt_dupes": 3236, 
            "dupes_pct": 0.010734
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 10657519, 
            "distinct_read_pairs": 6411331, 
            "one_read_pair": 3989485, 
            "two_read_pair": 1363466, 
            "NRF": 0.601578, 
            "PBC1": 0.622255, 
            "PBC2": 2.925988
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 53150030, 
            "distinct_read_pairs": 52630794, 
            "one_read_pair": 52121362, 
            "two_read_pair": 501851, 
            "NRF": 0.990231, 
            "PBC1": 0.990321, 
            "PBC2": 103.858241
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 12828432, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 12828432, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 12828432, 
            "paired_qc_failed": 0, 
            "read1": 6414216, 
            "read1_qc_failed": 0, 
            "read2": 6414216, 
            "read2_qc_failed": 0, 
            "paired_properly": 12828432, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 12828432, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 105993694, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 105993694, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 105993694, 
            "paired_qc_failed": 0, 
            "read1": 52996847, 
            "read1_qc_failed": 0, 
            "read2": 52996847, 
            "read2_qc_failed": 0, 
            "paired_properly": 105993694, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 105993694, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 63287, 
        "Np": 0, 
        "N_opt": 63287, 
        "N_consv": 63287, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 12201327, 
            "est_frag_len": 120, 
            "corr_est_frag_len": 0.199463143562327, 
            "phantom_peak": 55, 
            "corr_phantom_peak": 0.1737134, 
            "argmin_corr": 1500, 
            "min_corr": 0.1020516, 
            "NSC": 1.954532, 
            "RSC": 1.359323
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.497021835712
        }, 
        "rep1-pr1": {
            "FRiP": 0.571909550153
        }, 
        "rep1-pr2": {
            "FRiP": 0.573755344443
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.444082056584
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.0970867290541, 
            "auc": 0.488643725456, 
            "ch_div": 0.519118658435, 
            "elbow_pt": 1.33203335852e-65, 
            "jsd": 0.822352216749, 
            "syn_auc": 0.507680906504, 
            "syn_elbow_pt": 0.406572059998, 
            "syn_jsd": 0.480288343768
        }
    ]
}