{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 73932674, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 70866363, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 95.85, 
            "paired": 73932674, 
            "paired_qc_failed": 0, 
            "read1": 36966337, 
            "read1_qc_failed": 0, 
            "read2": 36966337, 
            "read2_qc_failed": 0, 
            "paired_properly": 69751141, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 94.34, 
            "with_itself": 70521486, 
            "with_itself_qc_failed": 0, 
            "singletons": 344877, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.47, 
            "diff_chroms": 398840, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 81954026, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 79524456, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 97.04, 
            "paired": 81954026, 
            "paired_qc_failed": 0, 
            "read1": 40977013, 
            "read1_qc_failed": 0, 
            "read2": 40977013, 
            "read2_qc_failed": 0, 
            "paired_properly": 77093830, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 94.07, 
            "with_itself": 79098584, 
            "with_itself_qc_failed": 0, 
            "singletons": 425872, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.52, 
            "diff_chroms": 1402744, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 30822545, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 475838, 
            "paired_opt_dupes": 7745, 
            "dupes_pct": 0.015438
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 34184517, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 147561, 
            "paired_opt_dupes": 4430, 
            "dupes_pct": 0.004317
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 30821739, 
            "distinct_read_pairs": 30345912, 
            "one_read_pair": 29875983, 
            "two_read_pair": 464175, 
            "NRF": 0.984562, 
            "PBC1": 0.984514, 
            "PBC2": 64.363619
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 34160894, 
            "distinct_read_pairs": 34013583, 
            "one_read_pair": 33872187, 
            "two_read_pair": 138075, 
            "NRF": 0.995688, 
            "PBC1": 0.995843, 
            "PBC2": 245.317306
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 60693414, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 60693414, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 60693414, 
            "paired_qc_failed": 0, 
            "read1": 30346707, 
            "read1_qc_failed": 0, 
            "read2": 30346707, 
            "read2_qc_failed": 0, 
            "paired_properly": 60693414, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 60693414, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 68073912, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 68073912, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 68073912, 
            "paired_qc_failed": 0, 
            "read1": 34036956, 
            "read1_qc_failed": 0, 
            "read2": 34036956, 
            "read2_qc_failed": 0, 
            "paired_properly": 68073912, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 68073912, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 48505, 
        "Np": 0, 
        "N_opt": 48505, 
        "N_consv": 48505, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 130, 
            "corr_est_frag_len": 0.18915627188498, 
            "phantom_peak": 50, 
            "corr_phantom_peak": 0.1995567, 
            "argmin_corr": 1500, 
            "min_corr": 0.1730633, 
            "NSC": 1.092989, 
            "RSC": 0.6074338
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.166768920967
        }, 
        "rep1-pr1": {
            "FRiP": 0.189012015852
        }, 
        "rep1-pr2": {
            "FRiP": 0.188263974403
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.135749635733
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.286332575646, 
            "auc": 0.494769845787, 
            "ch_div": 0.106984127619, 
            "elbow_pt": 0.0, 
            "jsd": 0.59616895619, 
            "syn_auc": 0.49573037689, 
            "syn_elbow_pt": 0.16458634955, 
            "syn_jsd": 0.284331688611
        }
    ]
}