{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 134765648, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 132979827, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.67, 
            "paired": 134765648, 
            "paired_qc_failed": 0, 
            "read1": 67382824, 
            "read1_qc_failed": 0, 
            "read2": 67382824, 
            "read2_qc_failed": 0, 
            "paired_properly": 132172838, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 98.08, 
            "with_itself": 132507313, 
            "with_itself_qc_failed": 0, 
            "singletons": 472514, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.35, 
            "diff_chroms": 91987, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 94272842, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 92659557, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.29, 
            "paired": 94272842, 
            "paired_qc_failed": 0, 
            "read1": 47136421, 
            "read1_qc_failed": 0, 
            "read2": 47136421, 
            "read2_qc_failed": 0, 
            "paired_properly": 91574742, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 97.14, 
            "with_itself": 92304558, 
            "with_itself_qc_failed": 0, 
            "singletons": 354999, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.38, 
            "diff_chroms": 370286, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 60041923, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 13551018, 
            "paired_opt_dupes": 3824, 
            "dupes_pct": 0.225693
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 40575988, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 1257392, 
            "paired_opt_dupes": 3763, 
            "dupes_pct": 0.030989
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 60013310, 
            "distinct_read_pairs": 46469160, 
            "one_read_pair": 36041175, 
            "two_read_pair": 7991996, 
            "NRF": 0.774314, 
            "PBC1": 0.775593, 
            "PBC2": 4.509659
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 40180957, 
            "distinct_read_pairs": 38989114, 
            "one_read_pair": 37836528, 
            "two_read_pair": 1116568, 
            "NRF": 0.970338, 
            "PBC1": 0.970438, 
            "PBC2": 33.886452
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 92981810, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 92981810, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 92981810, 
            "paired_qc_failed": 0, 
            "read1": 46490905, 
            "read1_qc_failed": 0, 
            "read2": 46490905, 
            "read2_qc_failed": 0, 
            "paired_properly": 92981810, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 92981810, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 78637192, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 78637192, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 78637192, 
            "paired_qc_failed": 0, 
            "read1": 39318596, 
            "read1_qc_failed": 0, 
            "read2": 39318596, 
            "read2_qc_failed": 0, 
            "paired_properly": 78637192, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 78637192, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 163703, 
        "Np": 0, 
        "N_opt": 163703, 
        "N_consv": 163703, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 180, 
            "corr_est_frag_len": 0.167316974020185, 
            "phantom_peak": 50, 
            "corr_phantom_peak": 0.1730088, 
            "argmin_corr": 1500, 
            "min_corr": 0.1618566, 
            "NSC": 1.033736, 
            "RSC": 0.4896247
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.238993265276
        }, 
        "rep1-pr1": {
            "FRiP": 0.235934328408
        }, 
        "rep1-pr2": {
            "FRiP": 0.236138861295
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.184635582956
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.273792905539, 
            "auc": 0.495774274237, 
            "ch_div": 0.105692893629, 
            "elbow_pt": 0.0, 
            "jsd": 0.640946849666, 
            "syn_auc": 0.504587594446, 
            "syn_elbow_pt": 0.143619558565, 
            "syn_jsd": 0.286689995599
        }
    ]
}