{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 90218004, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 86911472, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 96.33, 
            "paired": 90218004, 
            "paired_qc_failed": 0, 
            "read1": 45109002, 
            "read1_qc_failed": 0, 
            "read2": 45109002, 
            "read2_qc_failed": 0, 
            "paired_properly": 86231782, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 95.58, 
            "with_itself": 86510167, 
            "with_itself_qc_failed": 0, 
            "singletons": 401305, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.44, 
            "diff_chroms": 57504, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 139413336, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 137076202, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.32, 
            "paired": 139413336, 
            "paired_qc_failed": 0, 
            "read1": 69706668, 
            "read1_qc_failed": 0, 
            "read2": 69706668, 
            "read2_qc_failed": 0, 
            "paired_properly": 135724007, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 97.35, 
            "with_itself": 136521817, 
            "with_itself_qc_failed": 0, 
            "singletons": 554385, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.4, 
            "diff_chroms": 331576, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 39236060, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 25374259, 
            "paired_opt_dupes": 1983, 
            "dupes_pct": 0.646708
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 59910556, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 3644145, 
            "paired_opt_dupes": 3362, 
            "dupes_pct": 0.060826
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 39233350, 
            "distinct_read_pairs": 13860880, 
            "one_read_pair": 4149715, 
            "two_read_pair": 3315509, 
            "NRF": 0.353293, 
            "PBC1": 0.299383, 
            "PBC2": 1.251607
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 59868704, 
            "distinct_read_pairs": 56228098, 
            "one_read_pair": 52787644, 
            "two_read_pair": 3261892, 
            "NRF": 0.93919, 
            "PBC1": 0.938813, 
            "PBC2": 16.183137
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 27723602, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 27723602, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 27723602, 
            "paired_qc_failed": 0, 
            "read1": 13861801, 
            "read1_qc_failed": 0, 
            "read2": 13861801, 
            "read2_qc_failed": 0, 
            "paired_properly": 27723602, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 27723602, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 112532822, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 112532822, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 112532822, 
            "paired_qc_failed": 0, 
            "read1": 56266411, 
            "read1_qc_failed": 0, 
            "read2": 56266411, 
            "read2_qc_failed": 0, 
            "paired_properly": 112532822, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 112532822, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 66470, 
        "Np": 0, 
        "N_opt": 66470, 
        "N_consv": 66470, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 155, 
            "corr_est_frag_len": 0.392317934109538, 
            "phantom_peak": 55, 
            "corr_phantom_peak": 0.3245199, 
            "argmin_corr": 1500, 
            "min_corr": 0.1515083, 
            "NSC": 2.589416, 
            "RSC": 1.391869
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.697252123512
        }, 
        "rep1-pr1": {
            "FRiP": 0.698697110704
        }, 
        "rep1-pr2": {
            "FRiP": 0.698527741809
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.676467267422
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.060045730393, 
            "auc": 0.492278432488, 
            "ch_div": 0.468597807224, 
            "elbow_pt": 3.16786963248e-143, 
            "jsd": 0.90394611626, 
            "syn_auc": 0.49423969685, 
            "syn_elbow_pt": 0.574243275845, 
            "syn_jsd": 0.642593025459
        }
    ]
}
