{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 115244044, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 110805281, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 96.15, 
            "paired": 115244044, 
            "paired_qc_failed": 0, 
            "read1": 57622022, 
            "read1_qc_failed": 0, 
            "read2": 57622022, 
            "read2_qc_failed": 0, 
            "paired_properly": 109574060, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 95.08, 
            "with_itself": 109973790, 
            "with_itself_qc_failed": 0, 
            "singletons": 831491, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.72, 
            "diff_chroms": 122190, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 121920692, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 119191863, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 97.76, 
            "paired": 121920692, 
            "paired_qc_failed": 0, 
            "read1": 60960346, 
            "read1_qc_failed": 0, 
            "read2": 60960346, 
            "read2_qc_failed": 0, 
            "paired_properly": 117754194, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 96.58, 
            "with_itself": 118308645, 
            "with_itself_qc_failed": 0, 
            "singletons": 883218, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.72, 
            "diff_chroms": 122186, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 49705121, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 8070035, 
            "paired_opt_dupes": 6982, 
            "dupes_pct": 0.162358
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 50862870, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 879406, 
            "paired_opt_dupes": 8068, 
            "dupes_pct": 0.01729
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 49703193, 
            "distinct_read_pairs": 41633422, 
            "one_read_pair": 34856394, 
            "two_read_pair": 5683189, 
            "NRF": 0.837641, 
            "PBC1": 0.837221, 
            "PBC2": 6.133246
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 50817650, 
            "distinct_read_pairs": 49939924, 
            "one_read_pair": 49088463, 
            "two_read_pair": 832695, 
            "NRF": 0.982728, 
            "PBC1": 0.98295, 
            "PBC2": 58.951312
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 83270172, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 83270172, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 83270172, 
            "paired_qc_failed": 0, 
            "read1": 41635086, 
            "read1_qc_failed": 0, 
            "read2": 41635086, 
            "read2_qc_failed": 0, 
            "paired_properly": 83270172, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 83270172, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 99966928, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 99966928, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 99966928, 
            "paired_qc_failed": 0, 
            "read1": 49983464, 
            "read1_qc_failed": 0, 
            "read2": 49983464, 
            "read2_qc_failed": 0, 
            "paired_properly": 99966928, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 99966928, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 134008, 
        "Np": 0, 
        "N_opt": 134008, 
        "N_consv": 134008, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 180, 
            "corr_est_frag_len": 0.176994578914277, 
            "phantom_peak": 50, 
            "corr_phantom_peak": 0.1769435, 
            "argmin_corr": 1500, 
            "min_corr": 0.1670451, 
            "NSC": 1.059562, 
            "RSC": 1.005163
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.2876107977
        }, 
        "rep1-pr1": {
            "FRiP": 0.267246551713
        }, 
        "rep1-pr2": {
            "FRiP": 0.266283324008
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.223065048002
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.23371352473, 
            "auc": 0.495531032479, 
            "ch_div": 0.121815415558, 
            "elbow_pt": 0.0, 
            "jsd": 0.659836499841, 
            "syn_auc": 0.507125823743, 
            "syn_elbow_pt": 0.158407615936, 
            "syn_jsd": 0.352145447386
        }
    ]
}