{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 167320282, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 160645879, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 96.01, 
            "paired": 167320282, 
            "paired_qc_failed": 0, 
            "read1": 83660141, 
            "read1_qc_failed": 0, 
            "read2": 83660141, 
            "read2_qc_failed": 0, 
            "paired_properly": 158777889, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 94.89, 
            "with_itself": 159956928, 
            "with_itself_qc_failed": 0, 
            "singletons": 688951, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.41, 
            "diff_chroms": 257665, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 50889240, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 50058651, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.37, 
            "paired": 50889240, 
            "paired_qc_failed": 0, 
            "read1": 25444620, 
            "read1_qc_failed": 0, 
            "read2": 25444620, 
            "read2_qc_failed": 0, 
            "paired_properly": 49717706, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 97.7, 
            "with_itself": 49906072, 
            "with_itself_qc_failed": 0, 
            "singletons": 152579, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.3, 
            "diff_chroms": 67298, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 70607430, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 978194, 
            "paired_opt_dupes": 8575, 
            "dupes_pct": 0.013854
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 22060886, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 95014, 
            "paired_opt_dupes": 6064, 
            "dupes_pct": 0.004307
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 70604078, 
            "distinct_read_pairs": 69625930, 
            "one_read_pair": 68662206, 
            "two_read_pair": 950087, 
            "NRF": 0.986146, 
            "PBC1": 0.986159, 
            "PBC2": 72.269388
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 22024154, 
            "distinct_read_pairs": 21929940, 
            "one_read_pair": 21836362, 
            "two_read_pair": 93000, 
            "NRF": 0.995722, 
            "PBC1": 0.995733, 
            "PBC2": 234.799591
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 139258472, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 139258472, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 139258472, 
            "paired_qc_failed": 0, 
            "read1": 69629236, 
            "read1_qc_failed": 0, 
            "read2": 69629236, 
            "read2_qc_failed": 0, 
            "paired_properly": 139258472, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 139258472, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 43931744, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 43931744, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 43931744, 
            "paired_qc_failed": 0, 
            "read1": 21965872, 
            "read1_qc_failed": 0, 
            "read2": 21965872, 
            "read2_qc_failed": 0, 
            "paired_properly": 43931744, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 43931744, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 60392, 
        "Np": 0, 
        "N_opt": 60392, 
        "N_consv": 60392, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 125, 
            "corr_est_frag_len": 0.1833169349517, 
            "phantom_peak": 50, 
            "corr_phantom_peak": 0.2012091, 
            "argmin_corr": 1500, 
            "min_corr": 0.1751615, 
            "NSC": 1.046559, 
            "RSC": 0.313097
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.0631978129412
        }, 
        "rep1-pr1": {
            "FRiP": 0.0827852640532
        }, 
        "rep1-pr2": {
            "FRiP": 0.0826957715322
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.0478137239962
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.293002220886, 
            "auc": 0.496551877422, 
            "ch_div": 0.0999320271891, 
            "elbow_pt": 0.0, 
            "jsd": 0.598010795682, 
            "syn_auc": 0.5012950324, 
            "syn_elbow_pt": 0.064354173778, 
            "syn_jsd": 0.263451017183
        }
    ]
}