{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 100977754, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 94591289, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 93.68, 
            "paired": 100977754, 
            "paired_qc_failed": 0, 
            "read1": 50488877, 
            "read1_qc_failed": 0, 
            "read2": 50488877, 
            "read2_qc_failed": 0, 
            "paired_properly": 88334927, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 87.48, 
            "with_itself": 89041132, 
            "with_itself_qc_failed": 0, 
            "singletons": 5550157, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 5.5, 
            "diff_chroms": 400761, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 103045968, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 98644908, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 95.73, 
            "paired": 103045968, 
            "paired_qc_failed": 0, 
            "read1": 51522984, 
            "read1_qc_failed": 0, 
            "read2": 51522984, 
            "read2_qc_failed": 0, 
            "paired_properly": 94442886, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 91.65, 
            "with_itself": 95330195, 
            "with_itself_qc_failed": 0, 
            "singletons": 3314713, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 3.22, 
            "diff_chroms": 525331, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 36930242, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 3586735, 
            "paired_opt_dupes": 3411, 
            "dupes_pct": 0.097122
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 40142877, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 1418251, 
            "paired_opt_dupes": 4354, 
            "dupes_pct": 0.03533
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 36929536, 
            "distinct_read_pairs": 33342864, 
            "one_read_pair": 30104709, 
            "two_read_pair": 2922542, 
            "NRF": 0.902878, 
            "PBC1": 0.902883, 
            "PBC2": 10.300864
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 40111338, 
            "distinct_read_pairs": 38694462, 
            "one_read_pair": 37332587, 
            "two_read_pair": 1311871, 
            "NRF": 0.964676, 
            "PBC1": 0.964804, 
            "PBC2": 28.457514
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 66687014, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 66687014, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 66687014, 
            "paired_qc_failed": 0, 
            "read1": 33343507, 
            "read1_qc_failed": 0, 
            "read2": 33343507, 
            "read2_qc_failed": 0, 
            "paired_properly": 66687014, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 66687014, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 77449252, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 77449252, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 77449252, 
            "paired_qc_failed": 0, 
            "read1": 38724626, 
            "read1_qc_failed": 0, 
            "read2": 38724626, 
            "read2_qc_failed": 0, 
            "paired_properly": 77449252, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 77449252, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 152922, 
        "Np": 0, 
        "N_opt": 152922, 
        "N_consv": 152922, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 130, 
            "corr_est_frag_len": 0.171042960710184, 
            "phantom_peak": 50, 
            "corr_phantom_peak": 0.1771515, 
            "argmin_corr": 1500, 
            "min_corr": 0.1680687, 
            "NSC": 1.017697, 
            "RSC": 0.3274609
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.312864560765
        }, 
        "rep1-pr1": {
            "FRiP": 0.293983024374
        }, 
        "rep1-pr2": {
            "FRiP": 0.293276606353
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.249922292218
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.243888274602, 
            "auc": 0.494995281421, 
            "ch_div": 0.115413758564, 
            "elbow_pt": 0.0, 
            "jsd": 0.682412237121, 
            "syn_auc": 0.49560519927, 
            "syn_elbow_pt": 0.179570640623, 
            "syn_jsd": 0.333976486406
        }
    ]
}