{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 62406204, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 59491792, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 95.33, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 34238923, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 33598356, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.13, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 46764794, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 12285831, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.262715
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 29707899, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 3104749, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.104509
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 46761490, 
            "distinct_read_pairs": 35005143, 
            "one_read_pair": 26110075, 
            "two_read_pair": 6793079, 
            "NRF": 0.748589, 
            "PBC1": 0.745893, 
            "PBC2": 3.843629
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 29688485, 
            "distinct_read_pairs": 26666970, 
            "one_read_pair": 23918804, 
            "two_read_pair": 2514783, 
            "NRF": 0.898226, 
            "PBC1": 0.896945, 
            "PBC2": 9.51128
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 34478963, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 34478963, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 26603150, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 26603150, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 62656, 
        "Np": 0, 
        "N_opt": 62656, 
        "N_consv": 62656, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 160, 
            "corr_est_frag_len": 0.245409659079093, 
            "phantom_peak": 75, 
            "corr_phantom_peak": 0.2657816, 
            "argmin_corr": 1500, 
            "min_corr": 0.2149955, 
            "NSC": 1.141464, 
            "RSC": 0.5988679
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.339292818983
        }, 
        "rep1-pr1": {
            "FRiP": 0.345640199219
        }, 
        "rep1-pr2": {
            "FRiP": 0.345776427248
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.312576332373
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.176541188667, 
            "auc": 0.493055670876, 
            "ch_div": 0.154054389073, 
            "elbow_pt": 2.05867657083e-177, 
            "jsd": 0.752514125084, 
            "syn_auc": 0.496184350202, 
            "syn_elbow_pt": 0.332753223093, 
            "syn_jsd": 0.453334553874
        }
    ]
}
