{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 70732760, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 61709950, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 87.24, 
            "paired": 70732760, 
            "paired_qc_failed": 0, 
            "read1": 35366380, 
            "read1_qc_failed": 0, 
            "read2": 35366380, 
            "read2_qc_failed": 0, 
            "paired_properly": 57422991, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 81.18, 
            "with_itself": 57819972, 
            "with_itself_qc_failed": 0, 
            "singletons": 3889978, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 5.5, 
            "diff_chroms": 246915, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 115682520, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 110134967, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 95.2, 
            "paired": 115682520, 
            "paired_qc_failed": 0, 
            "read1": 57841260, 
            "read1_qc_failed": 0, 
            "read2": 57841260, 
            "read2_qc_failed": 0, 
            "paired_properly": 104877577, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 90.66, 
            "with_itself": 106096677, 
            "with_itself_qc_failed": 0, 
            "singletons": 4038290, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 3.49, 
            "diff_chroms": 752647, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 23224536, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 19649952, 
            "paired_opt_dupes": 2291, 
            "dupes_pct": 0.846086
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 44143515, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 1315729, 
            "paired_opt_dupes": 4867, 
            "dupes_pct": 0.029806
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 23223884, 
            "distinct_read_pairs": 3574462, 
            "one_read_pair": 511264, 
            "two_read_pair": 437861, 
            "NRF": 0.153913, 
            "PBC1": 0.143032, 
            "PBC2": 1.16764
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 44113008, 
            "distinct_read_pairs": 42798457, 
            "one_read_pair": 41528318, 
            "two_read_pair": 1233455, 
            "NRF": 0.9702, 
            "PBC1": 0.970323, 
            "PBC2": 33.668288
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 7149168, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 7149168, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 7149168, 
            "paired_qc_failed": 0, 
            "read1": 3574584, 
            "read1_qc_failed": 0, 
            "read2": 3574584, 
            "read2_qc_failed": 0, 
            "paired_properly": 7149168, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 7149168, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 85655572, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 85655572, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 85655572, 
            "paired_qc_failed": 0, 
            "read1": 42827786, 
            "read1_qc_failed": 0, 
            "read2": 42827786, 
            "read2_qc_failed": 0, 
            "paired_properly": 85655572, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 85655572, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 52757, 
        "Np": 0, 
        "N_opt": 52757, 
        "N_consv": 52757, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 145, 
            "corr_est_frag_len": 0.0648496396630692, 
            "phantom_peak": 50, 
            "corr_phantom_peak": 0.05649282, 
            "argmin_corr": 1500, 
            "min_corr": 0.04501312, 
            "NSC": 1.440683, 
            "RSC": 1.727966
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.510233131196
        }, 
        "rep1-pr1": {
            "FRiP": 0.503923660808
        }, 
        "rep1-pr2": {
            "FRiP": 0.504633976301
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.358316818055
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.0838489552387, 
            "auc": 0.484745599461, 
            "ch_div": 0.643651848816, 
            "elbow_pt": 5.58788102843e-36, 
            "jsd": 0.729855953297, 
            "syn_auc": 0.501411813193, 
            "syn_elbow_pt": 0.304168427229, 
            "syn_jsd": 0.399332892326
        }
    ]
}