{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 83249222, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 80052027, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 96.16, 
            "paired": 83249222, 
            "paired_qc_failed": 0, 
            "read1": 41624611, 
            "read1_qc_failed": 0, 
            "read2": 41624611, 
            "read2_qc_failed": 0, 
            "paired_properly": 79354893, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 95.32, 
            "with_itself": 79560676, 
            "with_itself_qc_failed": 0, 
            "singletons": 491351, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.59, 
            "diff_chroms": 70422, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 102780848, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 100831339, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.1, 
            "paired": 102780848, 
            "paired_qc_failed": 0, 
            "read1": 51390424, 
            "read1_qc_failed": 0, 
            "read2": 51390424, 
            "read2_qc_failed": 0, 
            "paired_properly": 99231317, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 96.55, 
            "with_itself": 99905065, 
            "with_itself_qc_failed": 0, 
            "singletons": 926274, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.9, 
            "diff_chroms": 333186, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 36534822, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 20283382, 
            "paired_opt_dupes": 2862, 
            "dupes_pct": 0.555179
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 43402346, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 817520, 
            "paired_opt_dupes": 3763, 
            "dupes_pct": 0.018836
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 36533857, 
            "distinct_read_pairs": 16250976, 
            "one_read_pair": 7577566, 
            "two_read_pair": 3810442, 
            "NRF": 0.44482, 
            "PBC1": 0.466284, 
            "PBC2": 1.988632
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 43363402, 
            "distinct_read_pairs": 42547036, 
            "one_read_pair": 41765324, 
            "two_read_pair": 759025, 
            "NRF": 0.981174, 
            "PBC1": 0.981627, 
            "PBC2": 55.024965
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 32502880, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 32502880, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 32502880, 
            "paired_qc_failed": 0, 
            "read1": 16251440, 
            "read1_qc_failed": 0, 
            "read2": 16251440, 
            "read2_qc_failed": 0, 
            "paired_properly": 32502880, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 32502880, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 85169652, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 85169652, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 85169652, 
            "paired_qc_failed": 0, 
            "read1": 42584826, 
            "read1_qc_failed": 0, 
            "read2": 42584826, 
            "read2_qc_failed": 0, 
            "paired_properly": 85169652, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 85169652, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 74417, 
        "Np": 0, 
        "N_opt": 74417, 
        "N_consv": 74417, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 130, 
            "corr_est_frag_len": 0.307007269821613, 
            "phantom_peak": 55, 
            "corr_phantom_peak": 0.2726746, 
            "argmin_corr": 1500, 
            "min_corr": 0.1612531, 
            "NSC": 1.903884, 
            "RSC": 1.308133
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.638825702964
        }, 
        "rep1-pr1": {
            "FRiP": 0.641470958493
        }, 
        "rep1-pr2": {
            "FRiP": 0.641310722023
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.609628513526
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.0761999033283, 
            "auc": 0.492845812606, 
            "ch_div": 0.407550021592, 
            "elbow_pt": 4.40226654252e-167, 
            "jsd": 0.863940070054, 
            "syn_auc": 0.513161276023, 
            "syn_elbow_pt": 0.49924784662, 
            "syn_jsd": 0.601060043502
        }
    ]
}