{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 63891320, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 53908659, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 84.38, 
            "paired": 63891320, 
            "paired_qc_failed": 0, 
            "read1": 31945660, 
            "read1_qc_failed": 0, 
            "read2": 31945660, 
            "read2_qc_failed": 0, 
            "paired_properly": 53505892, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 83.75, 
            "with_itself": 53651127, 
            "with_itself_qc_failed": 0, 
            "singletons": 257532, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.4, 
            "diff_chroms": 43923, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 82773480, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 80507886, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 97.26, 
            "paired": 82773480, 
            "paired_qc_failed": 0, 
            "read1": 41386740, 
            "read1_qc_failed": 0, 
            "read2": 41386740, 
            "read2_qc_failed": 0, 
            "paired_properly": 79812046, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 96.42, 
            "with_itself": 80154101, 
            "with_itself_qc_failed": 0, 
            "singletons": 353785, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.43, 
            "diff_chroms": 116542, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 24446188, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 13192019, 
            "paired_opt_dupes": 5668, 
            "dupes_pct": 0.539635
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 35609282, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 3238943, 
            "paired_opt_dupes": 8059, 
            "dupes_pct": 0.090958
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 24444302, 
            "distinct_read_pairs": 11253245, 
            "one_read_pair": 5077227, 
            "two_read_pair": 2848585, 
            "NRF": 0.460363, 
            "PBC1": 0.451179, 
            "PBC2": 1.782368
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 35576205, 
            "distinct_read_pairs": 32340103, 
            "one_read_pair": 29415039, 
            "two_read_pair": 2647904, 
            "NRF": 0.909037, 
            "PBC1": 0.909553, 
            "PBC2": 11.108801
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 22508338, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 22508338, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 22508338, 
            "paired_qc_failed": 0, 
            "read1": 11254169, 
            "read1_qc_failed": 0, 
            "read2": 11254169, 
            "read2_qc_failed": 0, 
            "paired_properly": 22508338, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 22508338, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 64740678, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 64740678, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 64740678, 
            "paired_qc_failed": 0, 
            "read1": 32370339, 
            "read1_qc_failed": 0, 
            "read2": 32370339, 
            "read2_qc_failed": 0, 
            "paired_properly": 64740678, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 64740678, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 55370, 
        "Np": 0, 
        "N_opt": 55370, 
        "N_consv": 55370, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 150, 
            "corr_est_frag_len": 0.179513332041111, 
            "phantom_peak": 50, 
            "corr_phantom_peak": 0.1669492, 
            "argmin_corr": 1500, 
            "min_corr": 0.1261494, 
            "NSC": 1.423022, 
            "RSC": 1.307947
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.394879844056
        }, 
        "rep1-pr1": {
            "FRiP": 0.398492009243
        }, 
        "rep1-pr2": {
            "FRiP": 0.398297380757
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.341477853822
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.149322080155, 
            "auc": 0.491410916266, 
            "ch_div": 0.30715588113, 
            "elbow_pt": 1.62822602485e-115, 
            "jsd": 0.720178497169, 
            "syn_auc": 0.494053125536, 
            "syn_elbow_pt": 0.313794902378, 
            "syn_jsd": 0.44466694819
        }
    ]
}