{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 14242503, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 13837529, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 97.16, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 42493642, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 41480935, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 97.62, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 12703082, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 392616, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.030907
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 36546875, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 7859962, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.215065
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 12702408, 
            "distinct_read_pairs": 12330717, 
            "one_read_pair": 11982065, 
            "two_read_pair": 331118, 
            "NRF": 0.970739, 
            "PBC1": 0.971725, 
            "PBC2": 36.186692
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 36514463, 
            "distinct_read_pairs": 28683322, 
            "one_read_pair": 21161389, 
            "two_read_pair": 7374457, 
            "NRF": 0.785533, 
            "PBC1": 0.737759, 
            "PBC2": 2.869552
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 12310466, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 12310466, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 28686913, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 28686913, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 59032, 
        "Np": 0, 
        "N_opt": 59032, 
        "N_consv": 59032, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 13836620, 
            "est_frag_len": 170, 
            "corr_est_frag_len": 0.247413182935462, 
            "phantom_peak": 80, 
            "corr_phantom_peak": 0.2383637, 
            "argmin_corr": 1500, 
            "min_corr": 0.1840374, 
            "NSC": 1.344363, 
            "RSC": 1.166577
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.396203992452
        }, 
        "rep1-pr1": {
            "FRiP": 0.402827724319
        }, 
        "rep1-pr2": {
            "FRiP": 0.402862818229
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.359516314931
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.138427157425, 
            "auc": 0.488362988346, 
            "ch_div": 0.352613290575, 
            "elbow_pt": 2.00397753477e-62, 
            "jsd": 0.704554814924, 
            "syn_auc": 0.519852595095, 
            "syn_elbow_pt": 0.317095449825, 
            "syn_jsd": 0.43944760637
        }
    ]
}