{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 99592998, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 94819675, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 95.21, 
            "paired": 99592998, 
            "paired_qc_failed": 0, 
            "read1": 49796499, 
            "read1_qc_failed": 0, 
            "read2": 49796499, 
            "read2_qc_failed": 0, 
            "paired_properly": 90978743, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 91.35, 
            "with_itself": 91528023, 
            "with_itself_qc_failed": 0, 
            "singletons": 3291652, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 3.31, 
            "diff_chroms": 303144, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 95805330, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 91174239, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 95.17, 
            "paired": 95805330, 
            "paired_qc_failed": 0, 
            "read1": 47902665, 
            "read1_qc_failed": 0, 
            "read2": 47902665, 
            "read2_qc_failed": 0, 
            "paired_properly": 87029614, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 90.84, 
            "with_itself": 88132031, 
            "with_itself_qc_failed": 0, 
            "singletons": 3042208, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 3.18, 
            "diff_chroms": 677774, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 39254722, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 10980181, 
            "paired_opt_dupes": 4494, 
            "dupes_pct": 0.279716
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 36289675, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 346498, 
            "paired_opt_dupes": 3852, 
            "dupes_pct": 0.009548
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 39253719, 
            "distinct_read_pairs": 28273801, 
            "one_read_pair": 20363853, 
            "two_read_pair": 5681261, 
            "NRF": 0.720283, 
            "PBC1": 0.720238, 
            "PBC2": 3.58439
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 36261516, 
            "distinct_read_pairs": 35915541, 
            "one_read_pair": 35581631, 
            "two_read_pair": 326616, 
            "NRF": 0.990459, 
            "PBC1": 0.990703, 
            "PBC2": 108.940257
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 56549082, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 56549082, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 56549082, 
            "paired_qc_failed": 0, 
            "read1": 28274541, 
            "read1_qc_failed": 0, 
            "read2": 28274541, 
            "read2_qc_failed": 0, 
            "paired_properly": 56549082, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 56549082, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 71886354, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 71886354, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 71886354, 
            "paired_qc_failed": 0, 
            "read1": 35943177, 
            "read1_qc_failed": 0, 
            "read2": 35943177, 
            "read2_qc_failed": 0, 
            "paired_properly": 71886354, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 71886354, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 72043, 
        "Np": 0, 
        "N_opt": 72043, 
        "N_consv": 72043, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 140, 
            "corr_est_frag_len": 0.181092949495459, 
            "phantom_peak": 50, 
            "corr_phantom_peak": 0.1810878, 
            "argmin_corr": 1500, 
            "min_corr": 0.160063, 
            "NSC": 1.131386, 
            "RSC": 1.000247
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.275854102531
        }, 
        "rep1-pr1": {
            "FRiP": 0.273610390283
        }, 
        "rep1-pr2": {
            "FRiP": 0.273637997015
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.234199551026
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.234263876925, 
            "auc": 0.494569650285, 
            "ch_div": 0.119816626381, 
            "elbow_pt": 3.74676791071e-291, 
            "jsd": 0.682436957821, 
            "syn_auc": 0.506428442287, 
            "syn_elbow_pt": 0.234561080351, 
            "syn_jsd": 0.364511473358
        }
    ]
}