{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 104284660, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 102062752, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 97.87, 
            "paired": 104284660, 
            "paired_qc_failed": 0, 
            "read1": 52142330, 
            "read1_qc_failed": 0, 
            "read2": 52142330, 
            "read2_qc_failed": 0, 
            "paired_properly": 100899580, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 96.75, 
            "with_itself": 101370150, 
            "with_itself_qc_failed": 0, 
            "singletons": 692602, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.66, 
            "diff_chroms": 162041, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 117734680, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 114419474, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 97.18, 
            "paired": 117734680, 
            "paired_qc_failed": 0, 
            "read1": 58867340, 
            "read1_qc_failed": 0, 
            "read2": 58867340, 
            "read2_qc_failed": 0, 
            "paired_properly": 106794606, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 90.71, 
            "with_itself": 112779340, 
            "with_itself_qc_failed": 0, 
            "singletons": 1640134, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 1.39, 
            "diff_chroms": 4519360, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 44947234, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 4795980, 
            "paired_opt_dupes": 4773, 
            "dupes_pct": 0.106702
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 44871469, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 32327508, 
            "paired_opt_dupes": 5828, 
            "dupes_pct": 0.720447
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 44945826, 
            "distinct_read_pairs": 40149984, 
            "one_read_pair": 35812608, 
            "two_read_pair": 3920028, 
            "NRF": 0.893297, 
            "PBC1": 0.891971, 
            "PBC2": 9.135804
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 44834362, 
            "distinct_read_pairs": 12531592, 
            "one_read_pair": 4645701, 
            "two_read_pair": 1813827, 
            "NRF": 0.279509, 
            "PBC1": 0.370719, 
            "PBC2": 2.56127
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 80302508, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 80302508, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 80302508, 
            "paired_qc_failed": 0, 
            "read1": 40151254, 
            "read1_qc_failed": 0, 
            "read2": 40151254, 
            "read2_qc_failed": 0, 
            "paired_properly": 80302508, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 80302508, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 25087922, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 25087922, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 25087922, 
            "paired_qc_failed": 0, 
            "read1": 12543961, 
            "read1_qc_failed": 0, 
            "read2": 12543961, 
            "read2_qc_failed": 0, 
            "paired_properly": 25087922, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 25087922, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 134195, 
        "Np": 0, 
        "N_opt": 134195, 
        "N_consv": 134195, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 135, 
            "corr_est_frag_len": 0.175254121720712, 
            "phantom_peak": 50, 
            "corr_phantom_peak": 0.18179, 
            "argmin_corr": 1500, 
            "min_corr": 0.1712423, 
            "NSC": 1.023428, 
            "RSC": 0.3803512
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.220678929785
        }, 
        "rep1-pr1": {
            "FRiP": 0.239383931012
        }, 
        "rep1-pr2": {
            "FRiP": 0.238911352991
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.188937609539
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.239469169161, 
            "auc": 0.495445707586, 
            "ch_div": 0.113330294452, 
            "elbow_pt": 0.0, 
            "jsd": 0.705112518593, 
            "syn_auc": 0.506976665904, 
            "syn_elbow_pt": 0.154713236402, 
            "syn_jsd": 0.345222783453
        }
    ]
}