{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 106088890, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 103220452, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 97.3, 
            "paired": 106088890, 
            "paired_qc_failed": 0, 
            "read1": 53044445, 
            "read1_qc_failed": 0, 
            "read2": 53044445, 
            "read2_qc_failed": 0, 
            "paired_properly": 102418014, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 96.54, 
            "with_itself": 102709992, 
            "with_itself_qc_failed": 0, 
            "singletons": 510460, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.48, 
            "diff_chroms": 58209, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 100468200, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 98722536, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.26, 
            "paired": 100468200, 
            "paired_qc_failed": 0, 
            "read1": 50234100, 
            "read1_qc_failed": 0, 
            "read2": 50234100, 
            "read2_qc_failed": 0, 
            "paired_properly": 97581946, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 97.13, 
            "with_itself": 98187762, 
            "with_itself_qc_failed": 0, 
            "singletons": 534774, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.53, 
            "diff_chroms": 175930, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 45223092, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 20203289, 
            "paired_opt_dupes": 9418, 
            "dupes_pct": 0.446747
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 42692718, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 481852, 
            "paired_opt_dupes": 6941, 
            "dupes_pct": 0.011287
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 45220524, 
            "distinct_read_pairs": 25018364, 
            "one_read_pair": 13111224, 
            "two_read_pair": 6747416, 
            "NRF": 0.553252, 
            "PBC1": 0.524064, 
            "PBC2": 1.943147
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 42649523, 
            "distinct_read_pairs": 42168744, 
            "one_read_pair": 41697848, 
            "two_read_pair": 463478, 
            "NRF": 0.988727, 
            "PBC1": 0.988833, 
            "PBC2": 89.967265
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 50039606, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 50039606, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 50039606, 
            "paired_qc_failed": 0, 
            "read1": 25019803, 
            "read1_qc_failed": 0, 
            "read2": 25019803, 
            "read2_qc_failed": 0, 
            "paired_properly": 50039606, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 50039606, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 84421732, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 84421732, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 84421732, 
            "paired_qc_failed": 0, 
            "read1": 42210866, 
            "read1_qc_failed": 0, 
            "read2": 42210866, 
            "read2_qc_failed": 0, 
            "paired_properly": 84421732, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 84421732, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 74281, 
        "Np": 0, 
        "N_opt": 74281, 
        "N_consv": 74281, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 150, 
            "corr_est_frag_len": 0.173074303012023, 
            "phantom_peak": 50, 
            "corr_phantom_peak": 0.1752226, 
            "argmin_corr": 1500, 
            "min_corr": 0.1504148, 
            "NSC": 1.150647, 
            "RSC": 0.913401
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.240439993546
        }, 
        "rep1-pr1": {
            "FRiP": 0.237697159143
        }, 
        "rep1-pr2": {
            "FRiP": 0.23783387772
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.180220795386
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.231716892107, 
            "auc": 0.494246166066, 
            "ch_div": 0.16090975067, 
            "elbow_pt": 3.86176651213e-259, 
            "jsd": 0.635721868684, 
            "syn_auc": 0.504023309022, 
            "syn_elbow_pt": 0.204215090348, 
            "syn_jsd": 0.344447150769
        }
    ]
}