{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 85997076, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 82322742, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 95.73, 
            "paired": 85997076, 
            "paired_qc_failed": 0, 
            "read1": 42998538, 
            "read1_qc_failed": 0, 
            "read2": 42998538, 
            "read2_qc_failed": 0, 
            "paired_properly": 81069731, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 94.27, 
            "with_itself": 81560169, 
            "with_itself_qc_failed": 0, 
            "singletons": 762573, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.89, 
            "diff_chroms": 75192, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 88401972, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 86180692, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 97.49, 
            "paired": 88401972, 
            "paired_qc_failed": 0, 
            "read1": 44200986, 
            "read1_qc_failed": 0, 
            "read2": 44200986, 
            "read2_qc_failed": 0, 
            "paired_properly": 85396352, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 96.6, 
            "with_itself": 85734619, 
            "with_itself_qc_failed": 0, 
            "singletons": 446073, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.5, 
            "diff_chroms": 70823, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 33389020, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 11606139, 
            "paired_opt_dupes": 19024, 
            "dupes_pct": 0.347603
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 37252914, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 7976046, 
            "paired_opt_dupes": 21511, 
            "dupes_pct": 0.214105
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 33384882, 
            "distinct_read_pairs": 21780057, 
            "one_read_pair": 13252558, 
            "two_read_pair": 6385599, 
            "NRF": 0.652393, 
            "PBC1": 0.608472, 
            "PBC2": 2.075382
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 37214341, 
            "distinct_read_pairs": 29246499, 
            "one_read_pair": 21451797, 
            "two_read_pair": 7649880, 
            "NRF": 0.785893, 
            "PBC1": 0.733483, 
            "PBC2": 2.8042
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 43565762, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 43565762, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 43565762, 
            "paired_qc_failed": 0, 
            "read1": 21782881, 
            "read1_qc_failed": 0, 
            "read2": 21782881, 
            "read2_qc_failed": 0, 
            "paired_properly": 43565762, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 43565762, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 58553736, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 58553736, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 58553736, 
            "paired_qc_failed": 0, 
            "read1": 29276868, 
            "read1_qc_failed": 0, 
            "read2": 29276868, 
            "read2_qc_failed": 0, 
            "paired_properly": 58553736, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 58553736, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 62001, 
        "Np": 0, 
        "N_opt": 62001, 
        "N_consv": 62001, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 205, 
            "corr_est_frag_len": 0.172417634242483, 
            "phantom_peak": 50, 
            "corr_phantom_peak": 0.202939, 
            "argmin_corr": 1500, 
            "min_corr": 0.1600659, 
            "NSC": 1.077167, 
            "RSC": 0.2881003
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.195833454622
        }, 
        "rep1-pr1": {
            "FRiP": 0.190611613615
        }, 
        "rep1-pr2": {
            "FRiP": 0.190983605278
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.143548653544
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.233774489443, 
            "auc": 0.493829368825, 
            "ch_div": 0.167928889031, 
            "elbow_pt": 4.17487721328e-225, 
            "jsd": 0.613594014907, 
            "syn_auc": 0.495687154388, 
            "syn_elbow_pt": 0.138221396161, 
            "syn_jsd": 0.329541434412
        }
    ]
}