{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 92134798, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 83375147, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 90.49, 
            "paired": 92134798, 
            "paired_qc_failed": 0, 
            "read1": 46067399, 
            "read1_qc_failed": 0, 
            "read2": 46067399, 
            "read2_qc_failed": 0, 
            "paired_properly": 82180351, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 89.2, 
            "with_itself": 82853307, 
            "with_itself_qc_failed": 0, 
            "singletons": 521840, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.57, 
            "diff_chroms": 96920, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 141046192, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 133545822, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 94.68, 
            "paired": 141046192, 
            "paired_qc_failed": 0, 
            "read1": 70523096, 
            "read1_qc_failed": 0, 
            "read2": 70523096, 
            "read2_qc_failed": 0, 
            "paired_properly": 131515734, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 93.24, 
            "with_itself": 132854680, 
            "with_itself_qc_failed": 0, 
            "singletons": 691142, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.49, 
            "diff_chroms": 243760, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 37185561, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 12986617, 
            "paired_opt_dupes": 141646, 
            "dupes_pct": 0.349238
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 58232424, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 4001234, 
            "paired_opt_dupes": 6761, 
            "dupes_pct": 0.068711
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 37164766, 
            "distinct_read_pairs": 24185640, 
            "one_read_pair": 15643295, 
            "two_read_pair": 5560891, 
            "NRF": 0.650768, 
            "PBC1": 0.646801, 
            "PBC2": 2.813091
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 57912757, 
            "distinct_read_pairs": 53959656, 
            "one_read_pair": 50262057, 
            "two_read_pair": 3464802, 
            "NRF": 0.93174, 
            "PBC1": 0.931475, 
            "PBC2": 14.506473
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 48397888, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 48397888, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 48397888, 
            "paired_qc_failed": 0, 
            "read1": 24198944, 
            "read1_qc_failed": 0, 
            "read2": 24198944, 
            "read2_qc_failed": 0, 
            "paired_properly": 48397888, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 48397888, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 108462380, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 108462380, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 108462380, 
            "paired_qc_failed": 0, 
            "read1": 54231190, 
            "read1_qc_failed": 0, 
            "read2": 54231190, 
            "read2_qc_failed": 0, 
            "paired_properly": 108462380, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 108462380, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 110851, 
        "Np": 0, 
        "N_opt": 110851, 
        "N_consv": 110851, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 140, 
            "corr_est_frag_len": 0.197699649121881, 
            "phantom_peak": 50, 
            "corr_phantom_peak": 0.1890103, 
            "argmin_corr": 1500, 
            "min_corr": 0.1570243, 
            "NSC": 1.259039, 
            "RSC": 1.271662
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.378451406959
        }, 
        "rep1-pr1": {
            "FRiP": 0.385296914153
        }, 
        "rep1-pr2": {
            "FRiP": 0.384965436521
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.334349914354
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.195295879071, 
            "auc": 0.494154373024, 
            "ch_div": 0.147699578761, 
            "elbow_pt": 4.957854787e-251, 
            "jsd": 0.733617758016, 
            "syn_auc": 0.499163683824, 
            "syn_elbow_pt": 0.306628054109, 
            "syn_jsd": 0.421893614044
        }
    ]
}
