{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 31996423, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 26614408, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 83.18, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 34249117, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 31092823, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 90.78, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 22914788, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 743630, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.032452
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 26533016, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 266592, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.010048
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 22909503, 
            "distinct_read_pairs": 22343521, 
            "one_read_pair": 21820399, 
            "two_read_pair": 506502, 
            "NRF": 0.975295, 
            "PBC1": 0.976587, 
            "PBC2": 43.080578
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 26525031, 
            "distinct_read_pairs": 26309116, 
            "one_read_pair": 26128085, 
            "two_read_pair": 174455, 
            "NRF": 0.99186, 
            "PBC1": 0.993119, 
            "PBC2": 149.769769
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 22171158, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 22171158, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 26266424, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 26266424, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 19898, 
        "Np": 0, 
        "N_opt": 19898, 
        "N_consv": 19898, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 220, 
            "corr_est_frag_len": 0.180948021393746, 
            "phantom_peak": 75, 
            "corr_phantom_peak": 0.1916583, 
            "argmin_corr": 1500, 
            "min_corr": 0.1686564, 
            "NSC": 1.072879, 
            "RSC": 0.5343743
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.0964166700201
        }, 
        "rep1-pr1": {
            "FRiP": 0.0976373329224
        }, 
        "rep1-pr2": {
            "FRiP": 0.097608821615
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.0912839580046
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.28404590352, 
            "auc": 0.491219172183, 
            "ch_div": 0.128077429055, 
            "elbow_pt": 1.8123523427e-110, 
            "jsd": 0.56625494328, 
            "syn_auc": 0.510404455304, 
            "syn_elbow_pt": 0.123513391917, 
            "syn_jsd": 0.259426963029
        }
    ]
}
