/EXTERNAL Roadmap/K006479_K006480_2_lane_gembs/SRX263879_1_lanes

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SAMPLE K006479_K006480_2_lane_gembs LANE SRX263879_1_lanes

Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 186626417 100.00 % 186626417 100.00 % 0 0.00 %
General Reads 175800344 94.20 % 175800344 94.20 % 0 0.00 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 410671 0.22 % 410671 0.22 % 0 0.00 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 10415402 5.58 % 10415402 5.58 % 0 0.00 %
Bisulfite_reads C2T 88988219 47.68 % 88988219 47.68 % 0 0.00 %
Bisulfite_reads G2A 87222796 46.74 % 87222796 46.74 % 0 0.00 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 148709897
Average Unique 84.39 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 5777250094 30.65 %
Base Counts Overall C 164486367 0.87 %
Base Counts Overall G 3731334054 19.80 %
Base Counts Overall T 8919256150 47.32 %
Base Counts Overall N 256941452 1.36 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate 0.995108424612264
Over Conversion Rate NA



Mapping Quality

Mapping Quality Histogram
SRX263879_1_lanes.mapq.png



Read Length

Read Length Reads
100 186626417