{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 46854445, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 44488616, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 94.95, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 29032631, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 25391349, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 87.46, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 38324984, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 693162, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.018086
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 21484108, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 314158, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.014623
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 38324640, 
            "distinct_read_pairs": 37912001, 
            "one_read_pair": 37517263, 
            "two_read_pair": 386555, 
            "NRF": 0.989233, 
            "PBC1": 0.989588, 
            "PBC2": 97.055433
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 21482373, 
            "distinct_read_pairs": 21306001, 
            "one_read_pair": 21154642, 
            "two_read_pair": 145456, 
            "NRF": 0.99179, 
            "PBC1": 0.992896, 
            "PBC2": 145.436709
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 37631822, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 37631822, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 21169950, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 21169950, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 49148, 
        "Np": 0, 
        "N_opt": 49148, 
        "N_consv": 49148, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 155, 
            "corr_est_frag_len": 0.176156615750254, 
            "phantom_peak": 75, 
            "corr_phantom_peak": 0.1849192, 
            "argmin_corr": 1500, 
            "min_corr": 0.1724283, 
            "NSC": 1.021622, 
            "RSC": 0.2984812
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.0571259161611
        }, 
        "rep1-pr1": {
            "FRiP": 0.113610613921
        }, 
        "rep1-pr2": {
            "FRiP": 0.113188626842
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.0464061156876
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.273321466135, 
            "auc": 0.493135711123, 
            "ch_div": 0.120987896212, 
            "elbow_pt": 1.26460420084e-181, 
            "jsd": 0.58404675173, 
            "syn_auc": 0.501646211621, 
            "syn_elbow_pt": 0.0664674024276, 
            "syn_jsd": 0.273085861057
        }
    ]
}