{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 35626311, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 33424718, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 93.82, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 42892120, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 39343046, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 91.73, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 24864146, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 381675, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.01535
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 29623034, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 249825, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.008433
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 24863237, 
            "distinct_read_pairs": 24552730, 
            "one_read_pair": 24247563, 
            "two_read_pair": 300058, 
            "NRF": 0.987511, 
            "PBC1": 0.987571, 
            "PBC2": 80.809587
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 29607045, 
            "distinct_read_pairs": 29378140, 
            "one_read_pair": 29171513, 
            "two_read_pair": 203557, 
            "NRF": 0.992269, 
            "PBC1": 0.992967, 
            "PBC2": 143.308818
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 24482471, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 24482471, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 29373209, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 29373209, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 157526, 
        "Np": 0, 
        "N_opt": 157526, 
        "N_consv": 157526, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 145, 
            "corr_est_frag_len": 0.190860666431899, 
            "phantom_peak": 35, 
            "corr_phantom_peak": 0.1926543, 
            "argmin_corr": 1500, 
            "min_corr": 0.1853527, 
            "NSC": 1.029716, 
            "RSC": 0.7543574
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.394988519554
        }, 
        "rep1-pr1": {
            "FRiP": 0.35894639033
        }, 
        "rep1-pr2": {
            "FRiP": 0.35897645369
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.322224608592
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.157417658548, 
            "auc": 0.488139598078, 
            "ch_div": 0.254393471072, 
            "elbow_pt": 4.62177130199e-60, 
            "jsd": 0.735422073119, 
            "syn_auc": 0.502767803758, 
            "syn_elbow_pt": 0.281212079851, 
            "syn_jsd": 0.419474845278
        }
    ]
}