{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 29112713, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 27483687, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 94.4, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 27646270, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 26579986, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 96.14, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 21410944, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 498511, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.023283
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 18602676, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 135432, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.00728
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 21409635, 
            "distinct_read_pairs": 20936695, 
            "one_read_pair": 20478763, 
            "two_read_pair": 443985, 
            "NRF": 0.97791, 
            "PBC1": 0.978128, 
            "PBC2": 46.124898
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 18594051, 
            "distinct_read_pairs": 18468976, 
            "one_read_pair": 18352030, 
            "two_read_pair": 115134, 
            "NRF": 0.993273, 
            "PBC1": 0.993668, 
            "PBC2": 159.397137
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 20912433, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 20912433, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 18467244, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 18467244, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 53284, 
        "Np": 0, 
        "N_opt": 53284, 
        "N_consv": 53284, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 200, 
            "corr_est_frag_len": 0.202694046371303, 
            "phantom_peak": 35, 
            "corr_phantom_peak": 0.206182, 
            "argmin_corr": 1500, 
            "min_corr": 0.1911155, 
            "NSC": 1.060584, 
            "RSC": 0.7684976
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.279345011912
        }, 
        "rep1-pr1": {
            "FRiP": 0.292119637209
        }, 
        "rep1-pr2": {
            "FRiP": 0.291622200905
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.25495293914
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.169281225752, 
            "auc": 0.487189693751, 
            "ch_div": 0.256874607637, 
            "elbow_pt": 2.36384519237e-51, 
            "jsd": 0.726575151847, 
            "syn_auc": 0.510431552409, 
            "syn_elbow_pt": 0.252799228603, 
            "syn_jsd": 0.399736509341
        }
    ]
}
