{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 72960028, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 67093180, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 91.96, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 78105094, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 75369724, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 96.5, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 56561347, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 2970287, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.052514
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 57348907, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 1154090, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.020124
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 56556692, 
            "distinct_read_pairs": 53717928, 
            "one_read_pair": 51035842, 
            "two_read_pair": 2536315, 
            "NRF": 0.949807, 
            "PBC1": 0.950071, 
            "PBC2": 20.122044
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 57010863, 
            "distinct_read_pairs": 56218592, 
            "one_read_pair": 55465011, 
            "two_read_pair": 740482, 
            "NRF": 0.986103, 
            "PBC1": 0.986596, 
            "PBC2": 74.903929
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 53591060, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 53591060, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 56194817, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 56194817, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 184180, 
        "Np": 0, 
        "N_opt": 184180, 
        "N_consv": 184180, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 180, 
            "corr_est_frag_len": 0.190141940532737, 
            "phantom_peak": 35, 
            "corr_phantom_peak": 0.1881907, 
            "argmin_corr": 1500, 
            "min_corr": 0.1748641, 
            "NSC": 1.08737, 
            "RSC": 1.146417
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.423521879263
        }, 
        "rep1-pr1": {
            "FRiP": 0.35929574919
        }, 
        "rep1-pr2": {
            "FRiP": 0.359646740733
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.347964003095
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.164075905379, 
            "auc": 0.492000513187, 
            "ch_div": 0.19022466047, 
            "elbow_pt": 2.3209801542e-133, 
            "jsd": 0.731672987762, 
            "syn_auc": 0.511789127086, 
            "syn_elbow_pt": 0.28341470891, 
            "syn_jsd": 0.440205139439
        }
    ]
}
