{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 281747337, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 249984559, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 88.73, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 67697924, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 58130846, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 85.87, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 176971101, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 59140138, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.33418
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 40498600, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 598560, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.01478
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 176872016, 
            "distinct_read_pairs": 129950502, 
            "one_read_pair": 95701651, 
            "two_read_pair": 25033990, 
            "NRF": 0.734715, 
            "PBC1": 0.736447, 
            "PBC2": 3.822868
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 40444116, 
            "distinct_read_pairs": 39964790, 
            "one_read_pair": 39507536, 
            "two_read_pair": 449510, 
            "NRF": 0.988148, 
            "PBC1": 0.988559, 
            "PBC2": 87.890227
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 117830963, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 117830963, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 39900040, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 39900040, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 103313, 
        "Np": 0, 
        "N_opt": 103313, 
        "N_consv": 103313, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 110, 
            "corr_est_frag_len": 0.180356354833279, 
            "phantom_peak": 35, 
            "corr_phantom_peak": 0.1888368, 
            "argmin_corr": 1500, 
            "min_corr": 0.1712851, 
            "NSC": 1.05296, 
            "RSC": 0.516831
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.100605468815
        }, 
        "rep1-pr1": {
            "FRiP": 0.114701001443
        }, 
        "rep1-pr2": {
            "FRiP": 0.115031411425
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.083501896345
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.240472339678, 
            "auc": 0.494597197762, 
            "ch_div": 0.115834824418, 
            "elbow_pt": 3.96536705004e-294, 
            "jsd": 0.633542918262, 
            "syn_auc": 0.50851625579, 
            "syn_elbow_pt": 0.121811468326, 
            "syn_jsd": 0.338399742203
        }
    ]
}