/EXTERNAL Roadmap/K006489_1_lane_gembs/SRX248146_3_lanes
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 1772728252 | 100.00 % | 886364126 | 100.00 % | 886364126 | 100.00 % |
| General Reads | 1322438988 | 74.60 % | 665497574 | 75.08 % | 656941414 | 74.12 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 11493865 | 0.65 % | 5777141 | 0.65 % | 5716724 | 0.64 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 438795399 | 24.75 % | 215089411 | 24.27 % | 223705988 | 25.24 % |
| Bisulfite_reads C2T | 681511352 | 38.44 % | 343013930 | 38.70 % | 338497422 | 38.19 % |
| Bisulfite_reads G2A | 652421501 | 36.80 % | 328260785 | 37.03 % | 324160716 | 36.57 % |
| Concept | Value |
|---|---|
| Unique Fragments | 336747162 |
| Average Unique | 37.99 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 66760505134 | 37.29 % | 30722447757 | 34.32 % | 36038057377 | 40.26 % |
| Base Counts Overall C | 19697343457 | 11.00 % | 2286231739 | 2.55 % | 17411111718 | 19.45 % |
| Base Counts Overall G | 24616831598 | 13.75 % | 20663378204 | 23.08 % | 3953453394 | 4.42 % |
| Base Counts Overall T | 64644984760 | 36.11 % | 34142903087 | 38.14 % | 30502081673 | 34.07 % |
| Base Counts Overall N | 3325888503 | 1.86 % | 1707815939 | 1.91 % | 1618072564 | 1.81 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9547522368669173 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 421022526 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 100 | 886364126 |
| 100 | 886364126 |
| Insert Size Histogram |
|---|
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