{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 34446807, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 33344768, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 96.8, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 85291707, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 81932749, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 96.06, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 24444457, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 1724770, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.070559
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 63062391, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 1794921, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.028463
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 24438785, 
            "distinct_read_pairs": 22848948, 
            "one_read_pair": 21479090, 
            "two_read_pair": 1203097, 
            "NRF": 0.934946, 
            "PBC1": 0.940047, 
            "PBC2": 17.853166
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 62943984, 
            "distinct_read_pairs": 61397988, 
            "one_read_pair": 59944743, 
            "two_read_pair": 1410263, 
            "NRF": 0.975439, 
            "PBC1": 0.976331, 
            "PBC2": 42.506074
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 22719687, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 22719687, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 61267470, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 61267470, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 75910, 
        "Np": 0, 
        "N_opt": 75910, 
        "N_consv": 75910, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 135, 
            "corr_est_frag_len": 0.183455064233071, 
            "phantom_peak": 35, 
            "corr_phantom_peak": 0.188276, 
            "argmin_corr": 1500, 
            "min_corr": 0.1708719, 
            "NSC": 1.073641, 
            "RSC": 0.723
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.191283370365
        }, 
        "rep1-pr1": {
            "FRiP": 0.156889764767
        }, 
        "rep1-pr2": {
            "FRiP": 0.1569518508
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.0939363060701
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.183169473977, 
            "auc": 0.487717658555, 
            "ch_div": 0.300143149039, 
            "elbow_pt": 6.10271425625e-56, 
            "jsd": 0.648343189824, 
            "syn_auc": 0.522204200564, 
            "syn_elbow_pt": 0.151639749944, 
            "syn_jsd": 0.333083931382
        }
    ]
}
