{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 32649218, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 30988641, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 94.91, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 85291707, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 81932749, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 96.06, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 22106168, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 4254689, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.192466
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 63062391, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 1794921, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.028463
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 22094894, 
            "distinct_read_pairs": 18204538, 
            "one_read_pair": 15437522, 
            "two_read_pair": 2099251, 
            "NRF": 0.823925, 
            "PBC1": 0.848004, 
            "PBC2": 7.353824
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 62943984, 
            "distinct_read_pairs": 61397988, 
            "one_read_pair": 59944743, 
            "two_read_pair": 1410263, 
            "NRF": 0.975439, 
            "PBC1": 0.976331, 
            "PBC2": 42.506074
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 17851479, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 17851479, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 61267470, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 61267470, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 30267, 
        "Np": 0, 
        "N_opt": 30267, 
        "N_consv": 30267, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 145, 
            "corr_est_frag_len": 0.201999316005653, 
            "phantom_peak": 35, 
            "corr_phantom_peak": 0.2025187, 
            "argmin_corr": 1500, 
            "min_corr": 0.1547566, 
            "NSC": 1.305271, 
            "RSC": 0.9891247
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.211663751507
        }, 
        "rep1-pr1": {
            "FRiP": 0.208414242021
        }, 
        "rep1-pr2": {
            "FRiP": 0.208953569522
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.174708587213
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.168238696877, 
            "auc": 0.486132651381, 
            "ch_div": 0.331931832268, 
            "elbow_pt": 1.07168349356e-43, 
            "jsd": 0.644372603353, 
            "syn_auc": 0.502934734376, 
            "syn_elbow_pt": 0.234711397892, 
            "syn_jsd": 0.362844051433
        }
    ]
}
