/EXTERNAL Roadmap/K006490_K006491_K006492_3_lane_gembs/SRX190156_12_lanes

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SAMPLE K006490_K006491_K006492_3_lane_gembs LANE SRX190156_12_lanes

Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 2260960000 100.00 % 2260960000 100.00 % 0 0.00 %
General Reads 2220664144 98.22 % 2220664144 98.22 % 0 0.00 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 5466459 0.24 % 5466459 0.24 % 0 0.00 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 34829397 1.54 % 34829397 1.54 % 0 0.00 %
Bisulfite_reads C2T 1124056157 49.72 % 1124056157 49.72 % 0 0.00 %
Bisulfite_reads G2A 1102074446 48.74 % 1102074446 48.74 % 0 0.00 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 1911153417
Average Unique 85.85 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 70939868512 31.07 %
Base Counts Overall C 1762246682 0.77 %
Base Counts Overall G 45196756499 19.79 %
Base Counts Overall T 107916997060 47.26 %
Base Counts Overall N 2541091247 1.11 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate 0.9961061050686594
Over Conversion Rate NA



Mapping Quality

Mapping Quality Histogram
SRX190156_12_lanes.mapq.png



Read Length

Read Length Reads
100 2260960000