/EXTERNAL Roadmap/K006490_K006491_K006492_3_lane_gembs/SRX263888_1_lanes

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SAMPLE K006490_K006491_K006492_3_lane_gembs LANE SRX263888_1_lanes

Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 213451494 100.00 % 213451494 100.00 % 0 0.00 %
General Reads 202842817 95.03 % 202842817 95.03 % 0 0.00 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 1204440 0.56 % 1204440 0.56 % 0 0.00 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 9404237 4.41 % 9404237 4.41 % 0 0.00 %
Bisulfite_reads C2T 103049677 48.28 % 103049677 48.28 % 0 0.00 %
Bisulfite_reads G2A 100997580 47.32 % 100997580 47.32 % 0 0.00 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 176068705
Average Unique 86.29 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 6812083466 31.60 %
Base Counts Overall C 192440649 0.89 %
Base Counts Overall G 4190294621 19.44 %
Base Counts Overall T 10077511815 46.74 %
Base Counts Overall N 286270343 1.33 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate 0.9958998539616458
Over Conversion Rate NA



Mapping Quality

Mapping Quality Histogram
SRX263888_1_lanes.mapq.png



Read Length

Read Length Reads
100 213451494