/EXTERNAL Roadmap/K006493_K006494_K006495_K006496_4_lane_gembs/SRX175353_13_lanes

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SAMPLE K006493_K006494_K006495_K006496_4_lane_gembs LANE SRX175353_13_lanes

Mapping Stats (Reads)

Concept	Total Reads	%	Pair One Reads	%	Pair Two Reads	%
Sequenced Reads	2960376918	100.00 %	2960376918	100.00 %	0	0.00 %
General Reads	2878876646	97.25 %	2878876646	97.25 %	0	0.00 %
Reads in Control sequences	0	0.00 %	0	0.00 %	0	0.00 %
Reads under conversion control	9336147	0.32 %	9336147	0.32 %	0	0.00 %
Reads over conversion control	0	0.00 %	0	0.00 %	0	0.00 %
Unmapped reads	72164125	2.44 %	72164125	2.44 %	0	0.00 %
Bisulfite_reads C2T	1450689656	49.00 %	1450689656	49.00 %	0	0.00 %
Bisulfite_reads G2A	1437523137	48.56 %	1437523137	48.56 %	0	0.00 %

Uniqueness (Fragments)

Concept	Value
Unique Fragments	2471374908
Average Unique	85.57 %

Mapping Stats (Bases)

Concept	Total Bases	%	Pair One Bases	%	Pair Two Bases	%
Base Counts Overall A	90930991711	30.29 %
Base Counts Overall C	2754603673	0.92 %
Base Counts Overall G	66202293419	22.05 %
Base Counts Overall T	136832585081	45.58 %
Base Counts Overall N	3462590447	1.15 %

Bisulfite Conversion Rate

Bisulfite Conversion Type	Conversion Rate
Conversion Rate	0.9960123890572454
Over Conversion Rate	NA

Mapping Quality

Mapping Quality Histogram

Read Length

Read Length	Reads
101	1184995613
100	1775381305