{
    "name": "Histone ChIP-Seq SE ENCSR054PMB;ENCSR628CTX with input ENCSR642LNB;ENCSR785CRC", 
    "desc": "Histone ChIP-Seq SE ENCSR054PMB;ENCSR628CTX with input ENCSR642LNB;ENCSR785CRC", 
    "flagstat_qc": [
        {
            "total": 104576145, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 80300690, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 76.79, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 120495167, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 102562256, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 85.12, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 59519734, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 14823839, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.249058
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 70318999, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 1911817, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.027188
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 59496069, 
            "distinct_read_pairs": 47523608, 
            "one_read_pair": 38788095, 
            "two_read_pair": 6408638, 
            "NRF": 0.798769, 
            "PBC1": 0.816186, 
            "PBC2": 6.052471
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 70243509, 
            "distinct_read_pairs": 69049529, 
            "one_read_pair": 67900312, 
            "two_read_pair": 1125430, 
            "NRF": 0.983002, 
            "PBC1": 0.983357, 
            "PBC2": 60.332772
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 44695895, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 44695895, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 68407182, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 68407182, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 99073, 
        "Np": 0, 
        "N_opt": 99073, 
        "N_consv": 99073, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 235, 
            "corr_est_frag_len": 0.167776782244488, 
            "phantom_peak": 35, 
            "corr_phantom_peak": 0.1749777, 
            "argmin_corr": 1500, 
            "min_corr": 0.1607556, 
            "NSC": 1.043676, 
            "RSC": 0.4936826
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.242943956716
        }, 
        "rep1-pr1": {
            "FRiP": 0.191272396828
        }, 
        "rep1-pr2": {
            "FRiP": 0.191357665263
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.17662987953
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.235020184537, 
            "auc": 0.491216859631, 
            "ch_div": 0.142735757014, 
            "elbow_pt": 2.08381986399e-110, 
            "jsd": 0.659080003839, 
            "syn_auc": 0.51388321934, 
            "syn_elbow_pt": 0.16764594102, 
            "syn_jsd": 0.323876240404
        }
    ]
}