{
    "name": "Histone ChIP-Seq SE ENCSR075PTL;ENCSR264APD with input ENCSR642LNB;ENCSR785CRC", 
    "desc": "Histone ChIP-Seq SE ENCSR075PTL;ENCSR264APD with input ENCSR642LNB;ENCSR785CRC", 
    "flagstat_qc": [
        {
            "total": 100162129, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 79425816, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 79.3, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 120495167, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 102562256, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 85.12, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 51032583, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 6099107, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.119514
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 70318999, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 1911817, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.027188
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 51023448, 
            "distinct_read_pairs": 46695605, 
            "one_read_pair": 42866159, 
            "two_read_pair": 3426745, 
            "NRF": 0.915179, 
            "PBC1": 0.917991, 
            "PBC2": 12.509294
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 70243509, 
            "distinct_read_pairs": 69049529, 
            "one_read_pair": 67900312, 
            "two_read_pair": 1125430, 
            "NRF": 0.983002, 
            "PBC1": 0.983357, 
            "PBC2": 60.332772
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 44933476, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 44933476, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 68407182, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 68407182, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 44422, 
        "Np": 0, 
        "N_opt": 44422, 
        "N_consv": 44422, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 260, 
            "corr_est_frag_len": 0.218995828319264, 
            "phantom_peak": 35, 
            "corr_phantom_peak": 0.2491809, 
            "argmin_corr": 1500, 
            "min_corr": 0.1905091, 
            "NSC": 1.14953, 
            "RSC": 0.4855268
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.294367352244
        }, 
        "rep1-pr1": {
            "FRiP": 0.281685733775
        }, 
        "rep1-pr2": {
            "FRiP": 0.281571518608
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.275740668835
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.213744427507, 
            "auc": 0.491236526979, 
            "ch_div": 0.13857122293, 
            "elbow_pt": 6.50688179695e-111, 
            "jsd": 0.710609865327, 
            "syn_auc": 0.509682936738, 
            "syn_elbow_pt": 0.285757295297, 
            "syn_jsd": 0.391673605491
        }
    ]
}
