{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 84890014, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 62774140, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 73.95, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 26488249, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 18041882, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 68.11, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 56768193, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 2338528, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.041194
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 15450526, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 1080842, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.069955
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 56760588, 
            "distinct_read_pairs": 54921870, 
            "one_read_pair": 53167402, 
            "two_read_pair": 1679518, 
            "NRF": 0.967606, 
            "PBC1": 0.968055, 
            "PBC2": 31.656345
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 15439975, 
            "distinct_read_pairs": 14545411, 
            "one_read_pair": 13716890, 
            "two_read_pair": 776093, 
            "NRF": 0.942062, 
            "PBC1": 0.943039, 
            "PBC2": 17.674286
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 54429665, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 54429665, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 14369684, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 14369684, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 67289, 
        "Np": 0, 
        "N_opt": 67289, 
        "N_consv": 67289, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 115, 
            "corr_est_frag_len": 0.183852388603195, 
            "phantom_peak": 75, 
            "corr_phantom_peak": 0.1853222, 
            "argmin_corr": 1500, 
            "min_corr": 0.1752431, 
            "NSC": 1.049128, 
            "RSC": 0.8541756
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.081672846864
        }, 
        "rep1-pr1": {
            "FRiP": 0.11313412794
        }, 
        "rep1-pr2": {
            "FRiP": 0.112126075991
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.0666927534085
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.222676711918, 
            "auc": 0.49443777446, 
            "ch_div": 0.127836490209, 
            "elbow_pt": 2.04323296062e-277, 
            "jsd": 0.666632678766, 
            "syn_auc": 0.501518761629, 
            "syn_elbow_pt": 0.153345066352, 
            "syn_jsd": 0.36117888732
        }
    ]
}