/EXTERNAL Roadmap/K006499_1_lane_gembs/SRX175350_13_lanes

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SAMPLE K006499_1_lane_gembs LANE SRX175350_13_lanes

Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 3082745765 100.00 % 3082745765 100.00 % 0 0.00 %
General Reads 2774985945 90.02 % 2774985945 90.02 % 0 0.00 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 8691481 0.28 % 8691481 0.28 % 0 0.00 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 299068339 9.70 % 299068339 9.70 % 0 0.00 %
Bisulfite_reads C2T 1407205423 45.65 % 1407205423 45.65 % 0 0.00 %
Bisulfite_reads G2A 1376472003 44.65 % 1376472003 44.65 % 0 0.00 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 2355938404
Average Unique 84.63 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 89742838679 28.77 %
Base Counts Overall C 3271639433 1.05 %
Base Counts Overall G 65781421817 21.09 %
Base Counts Overall T 137406269261 44.05 %
Base Counts Overall N 15710324933 5.04 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate 0.9951491988191048
Over Conversion Rate NA



Mapping Quality

Mapping Quality Histogram
SRX175350_13_lanes.mapq.png



Read Length

Read Length Reads
101 555171858
100 2527573907