/EXTERNAL Roadmap/K006500_K006501_2_lane_gembs/SRX263878_1_lanes

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SAMPLE K006500_K006501_2_lane_gembs LANE SRX263878_1_lanes

Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 181111257 100.00 % 181111257 100.00 % 0 0.00 %
General Reads 170459989 94.12 % 170459989 94.12 % 0 0.00 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 372814 0.21 % 372814 0.21 % 0 0.00 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 10278454 5.68 % 10278454 5.68 % 0 0.00 %
Bisulfite_reads C2T 86327598 47.67 % 86327598 47.67 % 0 0.00 %
Bisulfite_reads G2A 84505205 46.66 % 84505205 46.66 % 0 0.00 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 144579238
Average Unique 84.63 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 5595348929 30.59 %
Base Counts Overall C 174105483 0.95 %
Base Counts Overall G 3618358662 19.78 %
Base Counts Overall T 8651559133 47.30 %
Base Counts Overall N 252864750 1.38 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate 0.9953224972881201
Over Conversion Rate NA



Mapping Quality

Mapping Quality Histogram
SRX263878_1_lanes.mapq.png



Read Length

Read Length Reads
100 181111257