/EXTERNAL Roadmap/K006502_K006503_K006504_K006505_4_lane_gembs/SRX259095_2_lanes
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 735441028 | 100.00 % | 367720514 | 100.00 % | 367720514 | 100.00 % |
| General Reads | 716094035 | 97.37 % | 358695937 | 97.55 % | 357398098 | 97.19 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 19346993 | 2.63 % | 9024577 | 2.45 % | 10322416 | 2.81 % |
| Bisulfite_reads C2T | 374379976 | 50.91 % | 187565131 | 51.01 % | 186814845 | 50.80 % |
| Bisulfite_reads G2A | 341714059 | 46.46 % | 171130806 | 46.54 % | 170583253 | 46.39 % |
| Concept | Value |
|---|---|
| Unique Fragments | 251659578 |
| Average Unique | 68.44 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 26927187358 | 36.25 % | 10669834191 | 28.73 % | 16257353167 | 43.77 % |
| Base Counts Overall C | 10022618238 | 13.49 % | 777353118 | 2.09 % | 9245265120 | 24.89 % |
| Base Counts Overall G | 10269989864 | 13.83 % | 9444686583 | 25.43 % | 825303281 | 2.22 % |
| Base Counts Overall T | 26306581839 | 35.42 % | 15876707625 | 42.75 % | 10429874214 | 28.08 % |
| Base Counts Overall N | 753166529 | 1.01 % | 371190397 | 1.00 % | 381976132 | 1.03 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 323132751 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 100 | 367720514 |
| 100 | 367720514 |
| Insert Size Histogram |
|---|
 |