{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 70835246, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 60320841, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 85.16, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 164016023, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 152074138, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 92.72, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 42626114, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 5569442, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.130658
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 104204596, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 3475715, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.033355
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 42618665, 
            "distinct_read_pairs": 37632272, 
            "one_read_pair": 33367026, 
            "two_read_pair": 3672146, 
            "NRF": 0.883, 
            "PBC1": 0.88666, 
            "PBC2": 9.086519
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 104078135, 
            "distinct_read_pairs": 101009176, 
            "one_read_pair": 98168242, 
            "two_read_pair": 2679190, 
            "NRF": 0.970513, 
            "PBC1": 0.971874, 
            "PBC2": 36.641015
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 37056672, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 37056672, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 100728881, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 100728881, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 38607, 
        "Np": 0, 
        "N_opt": 38607, 
        "N_consv": 38607, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 110, 
            "corr_est_frag_len": 0.21525898832479, 
            "phantom_peak": 35, 
            "corr_phantom_peak": 0.2021559, 
            "argmin_corr": 1500, 
            "min_corr": 0.1649576, 
            "NSC": 1.304936, 
            "RSC": 1.352248
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.204904720635
        }, 
        "rep1-pr1": {
            "FRiP": 0.192777755467
        }, 
        "rep1-pr2": {
            "FRiP": 0.192855105583
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.155721085523
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.187624621893, 
            "auc": 0.490363702141, 
            "ch_div": 0.187070409808, 
            "elbow_pt": 1.59870066914e-91, 
            "jsd": 0.686558600201, 
            "syn_auc": 0.506211722029, 
            "syn_elbow_pt": 0.235106340385, 
            "syn_jsd": 0.399710761248
        }
    ]
}