{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 60171700, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 55979025, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 93.03, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 93747327, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 89698428, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 95.68, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 38459628, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 3107488, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.080799
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 62644703, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 5818295, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.092878
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 38439485, 
            "distinct_read_pairs": 35682385, 
            "one_read_pair": 33158199, 
            "two_read_pair": 2366801, 
            "NRF": 0.928274, 
            "PBC1": 0.92926, 
            "PBC2": 14.009711
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 62231403, 
            "distinct_read_pairs": 57189079, 
            "one_read_pair": 52850690, 
            "two_read_pair": 3824724, 
            "NRF": 0.918975, 
            "PBC1": 0.92414, 
            "PBC2": 13.818171
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 35352140, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 35352140, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 56826408, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 56826408, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 72617, 
        "Np": 0, 
        "N_opt": 72617, 
        "N_consv": 72617, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 120, 
            "corr_est_frag_len": 0.187945838286991, 
            "phantom_peak": 50, 
            "corr_phantom_peak": 0.2164323, 
            "argmin_corr": 1500, 
            "min_corr": 0.1796899, 
            "NSC": 1.045946, 
            "RSC": 0.2246981
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.0980604147437
        }, 
        "rep1-pr1": {
            "FRiP": 0.113450634263
        }, 
        "rep1-pr2": {
            "FRiP": 0.112849186418
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.0380556480433
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.273998485442, 
            "auc": 0.491600271537, 
            "ch_div": 0.127590322664, 
            "elbow_pt": 7.72832443186e-121, 
            "jsd": 0.572676981641, 
            "syn_auc": 0.510745767595, 
            "syn_elbow_pt": 0.0325420713186, 
            "syn_jsd": 0.263969281549
        }
    ]
}
