/EXTERNAL Roadmap/K006538_K006539_2_lane_gembs/SRX259084_4_lanes
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 1469525056 | 100.00 % | 734762528 | 100.00 % | 734762528 | 100.00 % |
| General Reads | 1423916354 | 96.90 % | 714226309 | 97.21 % | 709690045 | 96.59 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 155 | 0.00 % | 80 | 0.00 % | 75 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 45608547 | 3.10 % | 20536139 | 2.79 % | 25072408 | 3.41 % |
| Bisulfite_reads C2T | 751755740 | 51.16 % | 377169968 | 51.33 % | 374585772 | 50.98 % |
| Bisulfite_reads G2A | 672160769 | 45.74 % | 337056421 | 45.87 % | 335104348 | 45.61 % |
| Concept | Value |
|---|---|
| Unique Fragments | 479778888 |
| Average Unique | 65.30 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 52661020002 | 35.48 % | 21270016132 | 28.66 % | 31391003870 | 42.30 % |
| Base Counts Overall C | 21204365988 | 14.29 % | 1592428947 | 2.15 % | 19611937041 | 26.43 % |
| Base Counts Overall G | 21670542662 | 14.60 % | 20087182289 | 27.07 % | 1583360373 | 2.13 % |
| Base Counts Overall T | 51334959475 | 34.59 % | 30500105830 | 41.10 % | 20834853645 | 28.08 % |
| Base Counts Overall N | 1551142529 | 1.05 % | 761282130 | 1.03 % | 789860399 | 1.06 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | -0.008368765503535712 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 648186857 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 100 | 734762528 |
| 100 | 734762528 |
| Insert Size Histogram |
|---|
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