/EXTERNAL Roadmap/K006521_K006522_K006523_3_lane_gembs

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SAMPLE K006521_K006522_K006523_3_lane_gembs




Mapping Stats (Reads)

Concept Total Reads %
Sequenced Reads 4111409528 100.00 %
General Reads 3944106238 95.93 %
Reads in Control sequences 0 0.00 %
Reads under conversion control 12579720 0.31 %
Reads over conversion control 0 0.00 %
Unmapped reads 154723570 3.76 %
Bisulfite_reads C2T 2010209553 48.89 %
Bisulfite_reads G2A 1946476405 47.34 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 3342130798
Average Unique 84.47 %



Mapping Stats (Bases)

Concept Total Bases %
Base Counts Overall A 126236733241 30.35 %
Base Counts Overall C 4030575197 0.97 %
Base Counts Overall G 88627580160 21.31 %
Base Counts Overall T 190493862136 45.81 %
Base Counts Overall N 6487989855 1.56 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate 0.9958611700636834
Over Conversion Rate NA



Mapping Quality

Mapping Quality Histogram
K006521_K006522_K006523_3_lane_gembs.mapq.png



Mapping Lanes Reports

LANE REPORTS
SRX175349_13_lanes
SRX388747_7_lanes
SRX263877_1_lanes