/EXTERNAL Roadmap/K006521_K006522_K006523_3_lane_gembs/SRX388747_7_lanes

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SAMPLE K006521_K006522_K006523_3_lane_gembs LANE SRX388747_7_lanes

Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 1156013673 100.00 % 1156013673 100.00 % 0 0.00 %
General Reads 1121786033 97.04 % 1121786033 97.04 % 0 0.00 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 2172885 0.19 % 2172885 0.19 % 0 0.00 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 32054755 2.77 % 32054755 2.77 % 0 0.00 %
Bisulfite_reads C2T 567950687 49.13 % 567950687 49.13 % 0 0.00 %
Bisulfite_reads G2A 556008231 48.10 % 556008231 48.10 % 0 0.00 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 974189169
Average Unique 86.67 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 36756759341 31.48 %
Base Counts Overall C 960239442 0.82 %
Base Counts Overall G 22889209371 19.60 %
Base Counts Overall T 54777177056 46.92 %
Base Counts Overall N 1373995763 1.18 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate 0.9961205631609948
Over Conversion Rate NA



Mapping Quality

Mapping Quality Histogram
SRX388747_7_lanes.mapq.png



Read Length

Read Length Reads
100 1156013673