{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 69128987, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 67832045, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.12, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 63107494, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 62273017, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.68, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 51294020, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 2947117, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.057455
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 46910703, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 625218, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.013328
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 51287401, 
            "distinct_read_pairs": 48542869, 
            "one_read_pair": 45951087, 
            "two_read_pair": 2457358, 
            "NRF": 0.946487, 
            "PBC1": 0.946608, 
            "PBC2": 18.699386
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 46843776, 
            "distinct_read_pairs": 46305633, 
            "one_read_pair": 45796459, 
            "two_read_pair": 501232, 
            "NRF": 0.988512, 
            "PBC1": 0.989004, 
            "PBC2": 91.367788
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 48346903, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 48346903, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 46285485, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 46285485, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 41545, 
        "Np": 0, 
        "N_opt": 41545, 
        "N_consv": 41545, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 140, 
            "corr_est_frag_len": 0.174702997910623, 
            "phantom_peak": 35, 
            "corr_phantom_peak": 0.1836757, 
            "argmin_corr": 1500, 
            "min_corr": 0.1709922, 
            "NSC": 1.021702, 
            "RSC": 0.292572
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.0532203402663
        }, 
        "rep1-pr1": {
            "FRiP": 0.0705879817092
        }, 
        "rep1-pr2": {
            "FRiP": 0.0704818245305
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.0304350985635
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.283050989969, 
            "auc": 0.491569920306, 
            "ch_div": 0.128054924667, 
            "elbow_pt": 5.88504841077e-120, 
            "jsd": 0.555432487764, 
            "syn_auc": 0.511673651963, 
            "syn_elbow_pt": 0.0744682291022, 
            "syn_jsd": 0.249041516464
        }
    ]
}