{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 256603505, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 237297776, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 92.48, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 222635237, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 193274380, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 86.81, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 166152478, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 18985439, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.114265
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 136989631, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 4415961, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.032236
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 166094050, 
            "distinct_read_pairs": 149724766, 
            "one_read_pair": 135337907, 
            "two_read_pair": 12733327, 
            "NRF": 0.901446, 
            "PBC1": 0.903911, 
            "PBC2": 10.628637
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 136862722, 
            "distinct_read_pairs": 134209169, 
            "one_read_pair": 131677278, 
            "two_read_pair": 2473324, 
            "NRF": 0.980612, 
            "PBC1": 0.981135, 
            "PBC2": 53.238993
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 147167039, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 147167039, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 132573670, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 132573670, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 26729, 
        "Np": 0, 
        "N_opt": 26729, 
        "N_consv": 26729, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 125, 
            "corr_est_frag_len": 0.186615984823613, 
            "phantom_peak": 35, 
            "corr_phantom_peak": 0.2026417, 
            "argmin_corr": 1500, 
            "min_corr": 0.1779091, 
            "NSC": 1.04894, 
            "RSC": 0.3520412
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.0650969632056
        }, 
        "rep1-pr1": {
            "FRiP": 0.0634595837874
        }, 
        "rep1-pr2": {
            "FRiP": 0.0630817980919
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.0486258887991
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.27969205448, 
            "auc": 0.495268107317, 
            "ch_div": 0.113049754287, 
            "elbow_pt": 0.0, 
            "jsd": 0.544979987125, 
            "syn_auc": 0.50366423055, 
            "syn_elbow_pt": 0.0883864694855, 
            "syn_jsd": 0.28573462034
        }
    ]
}
