/EXTERNAL Roadmap/K006525_K006526_K006527_K006528_K006529_5_lane_gembs/SRX043404_9_lanes

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SAMPLE K006525_K006526_K006527_K006528_K006529_5_lane_gembs LANE SRX043404_9_lanes

Mapping Stats (Reads)

Concept	Total Reads	%	Pair One Reads	%	Pair Two Reads	%
Sequenced Reads	269188366	100.00 %	269188366	100.00 %	0	0.00 %
General Reads	264205887	98.15 %	264205887	98.15 %	0	0.00 %
Reads in Control sequences	0	0.00 %	0	0.00 %	0	0.00 %
Reads under conversion control	851601	0.32 %	851601	0.32 %	0	0.00 %
Reads over conversion control	0	0.00 %	0	0.00 %	0	0.00 %
Unmapped reads	4130878	1.53 %	4130878	1.53 %	0	0.00 %
Bisulfite_reads C2T	135331583	50.27 %	135331583	50.27 %	0	0.00 %
Bisulfite_reads G2A	129725905	48.19 %	129725905	48.19 %	0	0.00 %

Uniqueness (Fragments)

Concept	Value
Unique Fragments	218687605
Average Unique	82.51 %

Mapping Stats (Bases)

Concept	Total Bases	%	Pair One Bases	%	Pair Two Bases	%
Base Counts Overall A	6512457621	28.28 %
Base Counts Overall C	270066617	1.17 %
Base Counts Overall G	5604124979	24.33 %
Base Counts Overall T	10372607514	45.04 %
Base Counts Overall N	271383913	1.18 %

Bisulfite Conversion Rate

Bisulfite Conversion Type	Conversion Rate
Conversion Rate	0.9943392050838
Over Conversion Rate	NA

Mapping Quality

Mapping Quality Histogram

Read Length

Read Length	Reads
84	30186981
85	209210768
82	29790617