/EXTERNAL Roadmap/K006525_K006526_K006527_K006528_K006529_5_lane_gembs/SRX043408_5_lanes

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SAMPLE K006525_K006526_K006527_K006528_K006529_5_lane_gembs LANE SRX043408_5_lanes

Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 419721444 100.00 % 419721444 100.00 % 0 0.00 %
General Reads 410170747 97.72 % 410170747 97.72 % 0 0.00 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 1804864 0.43 % 1804864 0.43 % 0 0.00 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 7745833 1.85 % 7745833 1.85 % 0 0.00 %
Bisulfite_reads C2T 210749587 50.21 % 210749587 50.21 % 0 0.00 %
Bisulfite_reads G2A 201226024 47.94 % 201226024 47.94 % 0 0.00 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 338381350
Average Unique 82.14 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 9796314004 23.38 %
Base Counts Overall C 369951026 0.88 %
Base Counts Overall G 7963782758 19.00 %
Base Counts Overall T 15017342696 35.83 %
Base Counts Overall N 8760870050 20.90 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate 0.9946070038708605
Over Conversion Rate NA



Mapping Quality

Mapping Quality Histogram
SRX043408_5_lanes.mapq.png



Read Length

Read Length Reads
85 32240354
100 387481090