{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 52725451, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 45433772, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 86.17, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 36146114, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 35337903, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 97.76, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 20881478, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 1152002, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.055169
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 27383177, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 305176, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.011145
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 20878386, 
            "distinct_read_pairs": 19803632, 
            "one_read_pair": 18852057, 
            "two_read_pair": 904324, 
            "NRF": 0.948523, 
            "PBC1": 0.951949, 
            "PBC2": 20.846574
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 27303377, 
            "distinct_read_pairs": 27073912, 
            "one_read_pair": 26854899, 
            "two_read_pair": 216168, 
            "NRF": 0.991596, 
            "PBC1": 0.991911, 
            "PBC2": 124.231612
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 19729476, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 19729476, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 27078001, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 27078001, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 100444, 
        "Np": 0, 
        "N_opt": 100444, 
        "N_consv": 100444, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 170, 
            "corr_est_frag_len": 0.225925202168861, 
            "phantom_peak": 35, 
            "corr_phantom_peak": 0.2772793, 
            "argmin_corr": 1500, 
            "min_corr": 0.2072525, 
            "NSC": 1.090096, 
            "RSC": 0.2666505
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.244226499132
        }, 
        "rep1-pr1": {
            "FRiP": 0.219979449558
        }, 
        "rep1-pr2": {
            "FRiP": 0.21952902479
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.151910909826
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.201671063356, 
            "auc": 0.486812609463, 
            "ch_div": 0.251042637162, 
            "elbow_pt": 2.08176807089e-48, 
            "jsd": 0.667387749063, 
            "syn_auc": 0.504710043366, 
            "syn_elbow_pt": 0.1704181789, 
            "syn_jsd": 0.321268366948
        }
    ]
}